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L1_008_241G1_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_67_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

235..678
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67865.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_67_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(829..1446)
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5U9L3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67866.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_67_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1388..1645)
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A7AZE9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67867.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_67_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1629..2015)
DNA (387bp) protein (129aa)
Sigma-70 region 4 n=2 Tax=Clostridiales RepID=R5TQ13_9FIRM
Sigma-70 region 4 {ECO:0000313|EMBL:CCZ67868.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
sigma-70 family RNA polymerase sigma factor
L1_008_241G1_scaffold_67_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1988..2179)
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TX10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67869.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_67_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2285..2992)
DNA (708bp) protein (236aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=3 Tax=Clostridiales RepID=A7AZF2_RUMGN
L1_008_241G1_scaffold_67_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2998..4023)
DNA (1026bp) protein (342aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Lachnospiraceae RepID=A7AZF3_RUMGN
L1_008_241G1_scaffold_67_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4039..4944)
DNA (906bp) protein (302aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=2 Tax=Clostridiales RepID=R5UGD1_9FIRM
L1_008_241G1_scaffold_67_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4946..5179)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TQ19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67873.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_67_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5310..6500)
DNA (1191bp) protein (397aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TX14_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CCZ67874.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L1_008_241G1_scaffold_67_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6575..7003)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67875.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
conserved hypothetical nucleotide-binding protein
L1_008_241G1_scaffold_67_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7110..8288)
DNA (1179bp) protein (393aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5U9M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67876.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_67_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8321..9034)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UGD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67877.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
IMP cyclohydrolase-like protein.
L1_008_241G1_scaffold_67_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9166..10497)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQ24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67878.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
CBS/transporter associated domain-containing protein
L1_008_241G1_scaffold_67_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10565..11956)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BRY3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17527.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L1_008_241G1_scaffold_67_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11994..12392)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TQB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67880.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
GntR family transcriptional regulator
L1_008_241G1_scaffold_67_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12417..12650)
DNA (234bp) protein (78aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZG4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45946.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_008_241G1_scaffold_67_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12743..13738)
DNA (996bp) protein (332aa)
L-asparaginase type II n=2 Tax=Clostridiales RepID=R5UGE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17524.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ans; asparaginase
L1_008_241G1_scaffold_67_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13833..14195)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TQ29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17523.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L1_008_241G1_scaffold_67_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14336..15295)
DNA (960bp) protein (320aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Biotin synthase n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZB6_9FIRM
biotin synthetase
L1_008_241G1_scaffold_67_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15363..16196)
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TQB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67885.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC transporter permease
L1_008_241G1_scaffold_67_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16175..16492)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5U9N8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67886.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC transporter permease
L1_008_241G1_scaffold_67_23
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

16742..17113
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R128_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32459.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Transposase and inactivated derivatives
L1_008_241G1_scaffold_67_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17222..17548
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5UGF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67887.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
tnpF1; transposase, fragment
L1_008_241G1_scaffold_67_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17826..19016)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TQ33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45781.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
XRE family transcriptional regulator
L1_008_241G1_scaffold_67_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19201..20445
DNA (1245bp) protein (415aa)
Transporter major facilitator family protein n=2 Tax=Clostridiales RepID=R5TX26_9FIRM
Transporter major facilitator family protein {ECO:0000313|EMBL:CCZ67889.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
major facilitator transporter
L1_008_241G1_scaffold_67_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20476..21285)
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45783.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
oxidoreductase
L1_008_241G1_scaffold_67_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21403..22434)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5U9P3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67891.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_67_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22444..23340)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45786.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
thioredoxin reductase
L1_008_241G1_scaffold_67_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23502..24383
DNA (882bp) protein (294aa)
LysR substrate binding domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQ39_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:CCZ67893.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
LysR family transcriptional regulator
Displaying items 1-30 of 77 in total

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