ggKbase home page

L1_008_241G1_scaffold_71

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_71_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2..118
DNA (117bp) protein (39aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=5 Tax=Erysipelotrichaceae RepID=B0N6H3_9FIRM
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EHQ44960.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_008_241G1_scaffold_71_2
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

141..1199
DNA (1059bp) protein (353aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Coprobacillus sp. D7 RepID=C3RMV0_9FIRM
L1_008_241G1_scaffold_71_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1201..2481
DNA (1281bp) protein (427aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=4 Tax=Coprobacillus RepID=C3RMV1_9FIRM
L1_008_241G1_scaffold_71_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2459..3526
DNA (1068bp) protein (356aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Chorismate synthase n=5 Tax=Erysipelotrichaceae RepID=B0N6H6_9FIRM
chorismate synthase
L1_008_241G1_scaffold_71_5
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3530..4648
DNA (1119bp) protein (373aa)
pheA2; bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5)
Chorismate mutase n=3 Tax=Erysipelotrichaceae RepID=B0N6H7_9FIRM
Chorismate mutase {ECO:0000313|EMBL:EHQ44964.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_008_241G1_scaffold_71_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4658..5164
DNA (507bp) protein (169aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Shikimate kinase n=4 Tax=Erysipelotrichaceae RepID=B0N6H8_9FIRM
aroK; hypothetical protein
L1_008_241G1_scaffold_71_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5161..6180)
DNA (1020bp) protein (340aa)
Diguanylate cyclase (GGDEF) domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N6H9_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CCZ34369.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
signaling protein
L1_008_241G1_scaffold_71_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6447..6851
DNA (405bp) protein (135aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N6I0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34370.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative acyl-CoA N-acyltransferase
L1_008_241G1_scaffold_71_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6863..7996
DNA (1134bp) protein (378aa)
Exonuclease SbcCD, D subunit n=2 Tax=Coprobacillus RepID=C3RMV8_9FIRM
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EHQ44968.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
exonuclease SbcD
L1_008_241G1_scaffold_71_10
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7986..11018
DNA (3033bp) protein (1011aa)
sbcC; exonuclease SbcC (EC:3.11.1.-)
Exonuclease SbcCD, C subunit n=3 Tax=Erysipelotrichaceae RepID=B0N6I2_9FIRM
Exonuclease SbcC {ECO:0000313|EMBL:EHM89786.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_008_241G1_scaffold_71_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


11072..12511
DNA (1440bp) protein (480aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
proS; proline--tRNA ligase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Coprobacillus sp. D7 RepID=C3RMW0_9FIRM
L1_008_241G1_scaffold_71_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12603..13031
DNA (429bp) protein (143aa)
Transcriptional regulator, MarR family n=5 Tax=Erysipelotrichaceae RepID=B0N6I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34399.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
MarR family transcriptional regulator
L1_008_241G1_scaffold_71_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13024..14358
DNA (1335bp) protein (445aa)
MATE efflux family protein n=2 Tax=Coprobacillus RepID=C3RMW2_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHM89783.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
multidrug transporter MatE
L1_008_241G1_scaffold_71_14
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14530..15141)
DNA (612bp) protein (204aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Erysipelotrichaceae RepID=B0N6I6_9FIRM
L1_008_241G1_scaffold_71_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15282..16094
DNA (813bp) protein (271aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Phosphomethylpyrimidine kinase n=3 Tax=Erysipelotrichaceae RepID=G9R5R1_9FIRM
phosphomethylpyrimidine kinase type-1
L1_008_241G1_scaffold_71_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16106..16750
DNA (645bp) protein (215aa)
Radical SAM domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N6I9_9FIRM
Radical SAM protein, TatD family-associated {ECO:0000313|EMBL:EHQ44975.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
radical SAM-superfamily protein
L1_008_241G1_scaffold_71_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16808..17542
DNA (735bp) protein (245aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N6J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44976.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
protein tyrosine/serine phosphatase
L1_008_241G1_scaffold_71_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17594..17998
DNA (405bp) protein (135aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N6J1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34435.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_241G1_scaffold_71_19
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18081..19397
DNA (1317bp) protein (439aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=C3RMW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44978.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
xanthine/uracil permease family protein
L1_008_241G1_scaffold_71_20
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19891..20361)
DNA (471bp) protein (157aa)
TspO/MBR family protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N6J3_9FIRM
TspO/MBR family protein {ECO:0000313|EMBL:EDS17431.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
TspO and MBR-like protein
L1_008_241G1_scaffold_71_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20502..21257
DNA (756bp) protein (252aa)
Exodeoxyribonuclease III (Xth) n=1 Tax=Coprobacillus sp. D7 RepID=C3RMX0_9FIRM
Exodeoxyribonuclease III {ECO:0000313|EMBL:CCZ31728.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
exodeoxyribonuclease III Xth
L1_008_241G1_scaffold_71_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21402..22766)
DNA (1365bp) protein (455aa)
Transporter n=4 Tax=Erysipelotrichaceae RepID=B0N6J5_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Na+-dependent transporters of the SNF family
L1_008_241G1_scaffold_71_23
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23024..24586)
DNA (1563bp) protein (521aa)
Amidohydrolase family protein n=3 Tax=Erysipelotrichaceae RepID=B0N6J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89773.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
amidohydrolase
L1_008_241G1_scaffold_71_24
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24666..25049)
DNA (384bp) protein (128aa)
CoA binding domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N6J7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89772.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
CoA-binding domain-containing protein
L1_008_241G1_scaffold_71_25
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25276..25608
DNA (333bp) protein (111aa)
Transcriptional regulator, PadR family n=4 Tax=Erysipelotrichaceae RepID=B0N6J8_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDS17436.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
PadR family transcriptional regulator
L1_008_241G1_scaffold_71_26
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25601..25705
DNA (105bp) protein (35aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9R5Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89770.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_008_241G1_scaffold_71_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26053..27801)
DNA (1749bp) protein (583aa)
PepF/M3 family oligoendopeptidase n=2 Tax=Coprobacillus RepID=C3RMX7_9FIRM
Oligoendopeptidase {ECO:0000313|EMBL:CCZ31856.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
oligoendopeptidase F
L1_008_241G1_scaffold_71_28
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28393..29574)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N6K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17439.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
putative PucR family transcriptional regulator
L1_008_241G1_scaffold_71_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29706..31637
DNA (1932bp) protein (644aa)
NADH:flavin oxidoreductase n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5QZE2_9FIRM
NADH:flavin oxidoreductase {ECO:0000313|EMBL:CCZ31859.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
NADH:flavin oxidoreductase
L1_008_241G1_scaffold_71_30
unknown

Not on your lists

31828..32712
DNA (885bp) protein (295aa)

This feature has no annotations

Displaying items 1-30 of 56 in total

View Taxonomy