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L1_008_241G1_scaffold_76

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_76_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(188..430)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C2GXJ0_BIFLN
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75525.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_76_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

555..938
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AGS2_BIFBR
Putative transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:BAP83657.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_008_241G1_scaffold_76_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1084..2127)
DNA (1044bp) protein (348aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Bifidobacterium breve RepID=D4BPX4_BIFBR
O-sialoglycoprotein endopeptidase
L1_008_241G1_scaffold_76_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2124..2723)
DNA (600bp) protein (200aa)
Ribosomal-protein-alanine acetyltransferase n=2 Tax=Bifidobacterium breve RepID=D4BPX5_BIFBR
Ribosomal-protein-S18-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EPD75522.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_76_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2738..3619)
DNA (882bp) protein (294aa)
Universal bacterial protein YeaZ n=2 Tax=Bifidobacterium breve RepID=D4BPX6_BIFBR
Glycoprotease protein family
Uncharacterized protein {ECO:0000313|EMBL:BAR00119.1}; Universal bacterial protein YeaZ {ECO:0000313|EMBL:EFE89713.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_241G1_scaffold_76_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3676..4242)
DNA (567bp) protein (189aa)
YjeE family ATPase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZMB7_BIFBR
YjeE family ATPase {ECO:0000313|EMBL:EPD75520.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
putative atpase
L1_008_241G1_scaffold_76_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4251..5222)
DNA (972bp) protein (324aa)
DNA polymerase III, delta subunit n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AGR7_BIFBR
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EPD75519.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
DNA polymerase III, delta subunit
L1_008_241G1_scaffold_76_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5301..7007)
DNA (1707bp) protein (569aa)
ComEC/Rec2-like protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BPX9_BIFBR
ComEC/Rec2-like protein {ECO:0000313|EMBL:EFE89716.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR00122.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
ComE operon protein 3
L1_008_241G1_scaffold_76_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7004..7429)
DNA (426bp) protein (142aa)
ComEA protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZZS5_BIFBR
ComE operon protein 1
ComEA protein {ECO:0000313|EMBL:EPD75517.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_76_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7857..10820)
DNA (2964bp) protein (988aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
leuS; Leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=2 Tax=Bifidobacterium breve RepID=D4BPY1_BIFBR
L1_008_241G1_scaffold_76_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10863..11744)
DNA (882bp) protein (294aa)
ABC transporter, substrate-binding protein, family 3 n=3 Tax=Bifidobacterium breve RepID=F6C957_BIFBA
ABC transporter substrate-binding protein
Putative solute binding protein of ABC transporter system {ECO:0000313|EMBL:AHJ21298.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_76_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11757..12707)
DNA (951bp) protein (317aa)
CorA-like protein n=5 Tax=Bifidobacterium breve RepID=F6C956_BIFBA
Magnesium and cobalt transport protein corA
Magnesium and cobalt transport protein corA {ECO:0000313|EMBL:AHJ21299.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_76_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12887..13732)
DNA (846bp) protein (282aa)
Phosphoglycerate mutase family protein n=5 Tax=Bifidobacterium breve RepID=F9Y145_BIFBU
Phosphoglycerate mutase family protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75513.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_76_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13801..15072
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZZS0_BIFBR
Methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EPD75512.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_76_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15154..15558)
DNA (405bp) protein (135aa)
Pyridoxamine 5'-phosphate oxidase pdxH n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y147_BIFBU
Pyridoxamine 5'-phosphate oxidase pdxH
Pyridoxamine 5'-phosphate oxidase pdxH {ECO:0000313|EMBL:AHJ21302.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_76_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15868..16728
DNA (861bp) protein (287aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=S2ZMA7_BIFBR
Transporter, drug/metabolite exporter family
Uncharacterized protein {ECO:0000313|EMBL:EPD75510.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_76_17
unknown

Not on your lists

comp(16725..17075)
DNA (351bp) protein (117aa)

This feature has no annotations

L1_008_241G1_scaffold_76_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17129..17500
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C951_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21304.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_76_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17672..18871
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZFI6_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75508.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_76_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18868..19032
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BPZ1_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE89728.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_241G1_scaffold_76_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19137..20480
DNA (1344bp) protein (448aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BSE7_BIFBR
phage integrase family protein
Putative phage integrase {ECO:0000313|EMBL:BAR00155.1}; Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFE88360.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_241G1_scaffold_76_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20621..21388)
DNA (768bp) protein (256aa)
Cell filamentation protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQJ9_BIFLS
cell filamentation protein
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ACJ52079.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L1_008_241G1_scaffold_76_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21391..21582)
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BU45_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY30463.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L1_008_241G1_scaffold_76_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21700..21993
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU46_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70897.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_008_241G1_scaffold_76_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22018..22845
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU47_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KIM01015.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L1_008_241G1_scaffold_76_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22904..23428)
DNA (525bp) protein (175aa)
Type III restriction-modification system methylation subunit (EC:2.1.1.72)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU48_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70899.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L1_008_241G1_scaffold_76_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23454..24428)
DNA (975bp) protein (325aa)
Fic family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU49_9BIFI
Fic family protein {ECO:0000313|EMBL:EEG70900.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Fic family protein
L1_008_241G1_scaffold_76_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24505..24945)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU50_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29381.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Hypothetical protein
L1_008_241G1_scaffold_76_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24967..25380)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZGG0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:KIM00875.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Hypothetical protein
L1_008_241G1_scaffold_76_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25512..26141)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BSE2_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE88355.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Displaying items 1-30 of 93 in total

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