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L1_008_241G1_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_88_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

300..980
DNA (681bp) protein (227aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BXU8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19642.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L1_008_241G1_scaffold_88_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1446..2258
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UI47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68462.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
L1_008_241G1_scaffold_88_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2249..2746
DNA (498bp) protein (166aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs (EC:1.2.99.2)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68463.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_88_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2728..5013
DNA (2286bp) protein (762aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TYN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68464.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_88_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5297..5578
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BWU1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43417.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_008_241G1_scaffold_88_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5680..5955
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68465.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_88_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5958..6449)
DNA (492bp) protein (164aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B8K7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43416.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_008_241G1_scaffold_88_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6819..8261
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UBX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68651.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_88_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8380..8934
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UIM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68652.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_88_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9162..10439
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68653.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
N-acetylmuramoyl-L-alanine amidase
L1_008_241G1_scaffold_88_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10662..12914
DNA (2253bp) protein (751aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EDN77400.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EDN77400.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
formate acetyltransferase 1 (EC:2.3.1.54)
Formate C-acetyltransferase n=3 Tax=Lachnospiraceae RepID=A7B374_RUMGN
L1_008_241G1_scaffold_88_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12992..13720
DNA (729bp) protein (243aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Pyruvate formate-lyase 1-activating enzyme n=4 Tax=Clostridiales RepID=A7B375_RUMGN
pyruvate formate-lyase activating enzyme
L1_008_241G1_scaffold_88_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13773..13934)
DNA (162bp) protein (54aa)
Rubredoxin n=4 Tax=Clostridiales RepID=A7B376_RUMGN
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
rubredoxin
L1_008_241G1_scaffold_88_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14237..15391
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UIM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68657.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_88_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15599..16087
DNA (489bp) protein (163aa)
Transcriptional regulator, MarR family n=4 Tax=Clostridiales RepID=A7B379_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43797.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
MarR-like transcriptional regulator
L1_008_241G1_scaffold_88_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16106..18340
DNA (2235bp) protein (745aa)
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7B380_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD21071.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_241G1_scaffold_88_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18333..20156
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68660.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_241G1_scaffold_88_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20256..20759
DNA (504bp) protein (168aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UBY0_9FIRM
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
GTP cyclohydrolase subunit MoaC
L1_008_241G1_scaffold_88_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20756..21256
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UIM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68662.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
molybdenum cofactor synthesis domain
L1_008_241G1_scaffold_88_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21229..22209
DNA (981bp) protein (327aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSB9_9FIRM
GTP cyclohydrolase subunit MoaA
L1_008_241G1_scaffold_88_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22216..22659
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TZ80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68664.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_88_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22751..23707
DNA (957bp) protein (319aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSE9_9FIRM
L1_008_241G1_scaffold_88_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23724..24464
DNA (741bp) protein (247aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UBY4_9FIRM
L1_008_241G1_scaffold_88_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24504..25661
DNA (1158bp) protein (386aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UIN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68667.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_88_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25709..26890
DNA (1182bp) protein (394aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
tRNA sulfurtransferase ThiI n=3 Tax=Lachnospiraceae RepID=V8C1V1_RUMGN
thiazole biosynthesis/tRNA modification protein ThiI
L1_008_241G1_scaffold_88_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26943..27176)
DNA (234bp) protein (78aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B391_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43786.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PTS HPr component phosphorylation site.
L1_008_241G1_scaffold_88_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27301..28593
DNA (1293bp) protein (431aa)
tRNA methylthiotransferase YqeV n=4 Tax=Clostridiales RepID=A7B392_RUMGN
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EGN43785.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
MiaB-like tRNA modifying enzyme
L1_008_241G1_scaffold_88_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28701..28964
DNA (264bp) protein (88aa)
UPF0297 protein RUMGNA_02021 n=4 Tax=Clostridiales RepID=A7B393_RUMGN
UPF0297 protein HMPREF1201_01065 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L1_008_241G1_scaffold_88_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28971..29417
DNA (447bp) protein (149aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
YqgF family RNAse H domain-containing protein n=4 Tax=Clostridiales RepID=V8C0Z3_RUMGN
conserved hypothetical protein TIGR00250
L1_008_241G1_scaffold_88_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29443..29703
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68673.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Protein of unknown function (DUF1292).
Displaying items 1-30 of 68 in total

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