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L1_008_241G1_scaffold_170

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_170_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..742
DNA (741bp) protein (247aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
DNA-directed RNA polymerase n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HZQ0_BIFLN
rpoB; DNA-directed RNA polymerase subunit beta
L1_008_241G1_scaffold_170_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

910..4947
DNA (4038bp) protein (1346aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
DNA-directed RNA polymerase subunit beta' n=13 Tax=Bacteria RepID=RPOC_BIFLD
rpoC; rpoc
L1_008_241G1_scaffold_170_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5106..5738)
DNA (633bp) protein (211aa)
Forkhead domain protein n=14 Tax=Bacteria RepID=E4R014_BIFLM
hypothetical protein
Signal peptide protein {ECO:0000313|EMBL:AIW43402.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_008_241G1_scaffold_170_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5754..6245)
DNA (492bp) protein (164aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=C5E852_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK34445.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_008_241G1_scaffold_170_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6272..7204)
DNA (933bp) protein (311aa)
Phosphatase n=10 Tax=Bifidobacterium longum RepID=F8ASE6_BIFLN
phosphatase
Protein phosphatase {ECO:0000313|EMBL:KEY23323.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_241G1_scaffold_170_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7201..9714)
DNA (2514bp) protein (838aa)
Putative membrane spanning protein n=1 Tax=Bifidobacterium longum E18 RepID=V6XX11_BIFLN
Putative membrane spanning protein {ECO:0000313|EMBL:ESV33026.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
hypothetical protein
L1_008_241G1_scaffold_170_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9711..10934)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G519_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW43406.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_008_241G1_scaffold_170_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10959..12332)
DNA (1374bp) protein (458aa)
MoxR-like ATPase n=9 Tax=Bifidobacterium RepID=B3DTD5_BIFLD
ATPase AAA
Methanol dehydrogenase regulatory protein homolog {ECO:0000313|EMBL:CCY94888.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_008_241G1_scaffold_170_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12343..18327)
DNA (5985bp) protein (1995aa)
Fibronectin type III domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ASX4_BIFLN
hypothetical protein
Fibronectin type III domain protein {ECO:0000313|EMBL:EIJ32262.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_008_241G1_scaffold_170_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18494..19915)
DNA (1422bp) protein (474aa)
Serine/threonine protein kinase n=13 Tax=Bifidobacterium RepID=B3DTD3_BIFLD
kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACD98402.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_241G1_scaffold_170_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20047..24357
DNA (4311bp) protein (1437aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GUV2_BIFLN
PD-(D/E)XK nuclease family protein {ECO:0000313|EMBL:EIJ32285.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L1_008_241G1_scaffold_170_12
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24354..28385
DNA (4032bp) protein (1344aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
ATP-dependent DNA helicase, UvrD/REP family n=4 Tax=Bifidobacterium RepID=V6XUW4_BIFLN
uvrD3; superfamily I DNA and RNA helicase
L1_008_241G1_scaffold_170_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28598..29917
DNA (1320bp) protein (440aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DTD0_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98399.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_241G1_scaffold_170_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30221..30976
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
4-hydroxy-tetrahydrodipicolinate reductase n=8 Tax=Bifidobacterium longum RepID=D6D9P5_BIFLN
dihydrodipicolinate reductase
L1_008_241G1_scaffold_170_15
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31118..32044
DNA (927bp) protein (309aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Bifidobacterium RepID=R5NBI0_9BIFI
dihydrodipicolinate synthase
L1_008_241G1_scaffold_170_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32087..33979
DNA (1893bp) protein (631aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=Q8G528_BIFLO
Uncharacterized protein {ECO:0000313|EMBL:EEQ54238.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L1_008_241G1_scaffold_170_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34021..36630
DNA (2610bp) protein (870aa)
Aminopeptidase N n=7 Tax=Bifidobacterium longum RepID=B3DTC6_BIFLD
Aminopeptidase N {ECO:0000313|EMBL:ACD98395.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
aminopeptidase
L1_008_241G1_scaffold_170_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36808..37713
DNA (906bp) protein (302aa)
Inner membrane like protein n=2 Tax=Bifidobacterium longum RepID=S3DQP4_BIFLN
transport protein
Putative transport protein {ECO:0000313|EMBL:BAJ66091.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_241G1_scaffold_170_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37912..38244
DNA (333bp) protein (111aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=Q8G531_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP83126.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_008_241G1_scaffold_170_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38260..38499
DNA (240bp) protein (80aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DTC3_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ21877.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_241G1_scaffold_170_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38513..39124)
DNA (612bp) protein (204aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=I3AST1_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ32204.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_008_241G1_scaffold_170_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39147..39962
DNA (816bp) protein (272aa)
Phosphoglucosamine mutase {ECO:0000255|HAMAP-Rule:MF_01554}; EC=5.4.2.10 {ECO:0000255|HAMAP-Rule:MF_01554};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Phosphoglucosamine mutase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZSW8_BIFLJ
glmM; phosphoglucosamine mutase
L1_008_241G1_scaffold_170_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39986..40639
DNA (654bp) protein (218aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Peptide deformylase 1 n=12 Tax=Bifidobacterium RepID=DEF1_BIFLO
def2; def2
L1_008_241G1_scaffold_170_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40636..42117
DNA (1482bp) protein (494aa)
DNA polymerase III epsilon subunit n=3 Tax=Bifidobacterium longum RepID=B3DTC0_BIFLD
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
DNA polymerase III epsilon subunit {ECO:0000313|EMBL:ACD98389.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_241G1_scaffold_170_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42500..43624
DNA (1125bp) protein (375aa)
Peptide chain release factor 2 n=15 Tax=Bifidobacterium longum RepID=B3DTB9_BIFLD
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_008_241G1_scaffold_170_26
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43633..44787
DNA (1155bp) protein (385aa)
Cell division ATP-binding protein FtsE n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XYE4_9BIFI
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EFV37385.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
ftsE; FtsE-like ATP binding protein involved in cell division
L1_008_241G1_scaffold_170_27
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44799..45722
DNA (924bp) protein (308aa)
Cell division protein FtsX n=8 Tax=Bifidobacterium RepID=D6D9N4_BIFLN
ftsX; ftsx
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_008_241G1_scaffold_170_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45825..47198
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G539_BIFLO
hypothetical protein
CHAP domain protein {ECO:0000313|EMBL:EIJ32275.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_008_241G1_scaffold_170_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47349..47825
DNA (477bp) protein (159aa)
SsrA-binding protein n=20 Tax=Bifidobacterium RepID=SSRP_BIFLD
SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_241G1_scaffold_170_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47862..49166)
DNA (1305bp) protein (435aa)
Transposase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPJ4_BIFLS
transposase
Transposase {ECO:0000313|EMBL:KEY28073.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Displaying items 1-30 of 40 in total

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