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L1_008_241G1_scaffold_177

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_177_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..856)
DNA (855bp) protein (285aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U9Z0_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCZ72439.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Outer membrane receptor proteins, mostly Fe transport
L1_008_241G1_scaffold_177_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(990..2159)
DNA (1170bp) protein (390aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEP1_9BACE
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EDM21407.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Fe2+-dicitrate sensor, membrane component
L1_008_241G1_scaffold_177_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2190..2699)
DNA (510bp) protein (170aa)
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Bacteroides RepID=I9EEB1_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CCZ72437.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L1_008_241G1_scaffold_177_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2744..4792)
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEN9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21405.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_241G1_scaffold_177_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4938..5516
DNA (579bp) protein (193aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZEN7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72435.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_241G1_scaffold_177_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5880..6407)
DNA (528bp) protein (176aa)
RNA methyltransferase, TrmH family n=3 Tax=Bacteroides RepID=A5ZEN6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72434.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
tRNA/rRNA methyltransferase
L1_008_241G1_scaffold_177_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6898..7836
DNA (939bp) protein (313aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Quinolinate synthase A n=2 Tax=Bacteroides RepID=I9PPT2_9BACE
quinolinate synthetase A
L1_008_241G1_scaffold_177_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7936..9294)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9EEB6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18304.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_241G1_scaffold_177_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9598..10506
DNA (909bp) protein (303aa)
Ser/Thr phosphatase family protein n=3 Tax=Bacteroides RepID=A5ZEN3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72431.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
calcineurin-like phosphoesterase
L1_008_241G1_scaffold_177_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10948..14130
DNA (3183bp) protein (1061aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides caccae RepID=I9PP75_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY18306.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
collagen-binding protein
L1_008_241G1_scaffold_177_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14148..16004
DNA (1857bp) protein (619aa)
Uncharacterized protein n=2 Tax=root RepID=I8UZ99_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18307.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_241G1_scaffold_177_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16048..18825
DNA (2778bp) protein (926aa)
TonB-linked outer membrane protein SusC/RagA family n=2 Tax=root RepID=R5U2V2_9BACE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CCZ72428.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
TonB-dependent Receptor Plug Domain./TonB dependent receptor.
L1_008_241G1_scaffold_177_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18840..20531
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UUN7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72427.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
starch-binding protein
L1_008_241G1_scaffold_177_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20649..21377
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZEM8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72426.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_241G1_scaffold_177_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21426..22484
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PP78_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72425.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_241G1_scaffold_177_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22508..23890
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U9X5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72424.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_241G1_scaffold_177_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24123..28145
DNA (4023bp) protein (1341aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEM5_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDM21391.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
histidine kinase
L1_008_241G1_scaffold_177_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28147..30408)
DNA (2262bp) protein (754aa)
afcA1; alpha-L-fucosidase (EC:3.2.1.51)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EEC4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18314.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_241G1_scaffold_177_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30689..31912
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UVW3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18315.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative exported hydrolase
L1_008_241G1_scaffold_177_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31924..33159
DNA (1236bp) protein (412aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZEM1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21387.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_241G1_scaffold_177_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33302..34138)
DNA (837bp) protein (279aa)
OmpA family protein n=3 Tax=Bacteroides RepID=A5ZEM0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18317.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
flagellar motor protein MotB
L1_008_241G1_scaffold_177_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(34170..34751)
DNA (582bp) protein (194aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEL9_9BACE
L1_008_241G1_scaffold_177_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34816..35733)
DNA (918bp) protein (306aa)
Uncharacterized protein n=4 Tax=root RepID=A5ZEL8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72415.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_241G1_scaffold_177_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35850..36833)
DNA (984bp) protein (328aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UVW8_9BACE
Displaying 24 items

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