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L1_008_241G1_scaffold_202

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_202_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(113..526)
DNA (414bp) protein (138aa)
Glycine cleavage system H protein n=18 Tax=root RepID=GCSH_BIFLO
glycine cleavage system protein H
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_008_241G1_scaffold_202_2
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(552..1844)
DNA (1293bp) protein (431aa)
Npy1 n=3 Tax=Bifidobacterium RepID=E4R034_BIFLM
npy1; npy1
NUDIX domain-containing protein {ECO:0000313|EMBL:EFV37428.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_008_241G1_scaffold_202_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1854..2711)
DNA (858bp) protein (286aa)
Alpha/beta hydrolase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MS03_BIFL1
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:BAJ70547.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_008_241G1_scaffold_202_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2839..3462)
DNA (624bp) protein (208aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3ATW0_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98433.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_241G1_scaffold_202_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3727..4101
DNA (375bp) protein (125aa)
Thioredoxin n=14 Tax=root RepID=B3DTG5_BIFLD
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_241G1_scaffold_202_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4171..5181
DNA (1011bp) protein (337aa)
G5 domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATV0_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KHD95876.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L1_008_241G1_scaffold_202_7
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5310..5735
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=I3AZ48_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:CCY96393.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L1_008_241G1_scaffold_202_8
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5725..5931
DNA (207bp) protein (69aa)
DNA-binding helix-turn-helix protein n=8 Tax=Bifidobacterium RepID=C5E882_BIFLI
Helix-turn-helix protein {ECO:0000313|EMBL:EFV37434.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
transcriptional regulator
L1_008_241G1_scaffold_202_9
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6261..6770
DNA (510bp) protein (170aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=V6XWX9_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EFV37435.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L1_008_241G1_scaffold_202_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6952..7512
DNA (561bp) protein (187aa)
Protein tyrosine phosphatase n=3 Tax=Bifidobacterium RepID=V6XUL1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:CCY96390.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L1_008_241G1_scaffold_202_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7790..8224
DNA (435bp) protein (145aa)
Uncharacterized protein n=8 Tax=root RepID=I3ATU6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ22539.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_241G1_scaffold_202_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8305..8475)
DNA (171bp) protein (57aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=C5E886_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54284.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_008_241G1_scaffold_202_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9017..9679)
DNA (663bp) protein (221aa)
Putative transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MMJ4_BIFLS
Transcriptional regulator {ECO:0000313|EMBL:KEY26220.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
putative transcriptional regulator
L1_008_241G1_scaffold_202_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10095..11414
DNA (1320bp) protein (440aa)
Putative membrane protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I089_BIFLN
Putative membrane protein {ECO:0000313|EMBL:CCK34408.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L1_008_241G1_scaffold_202_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11924..13321)
DNA (1398bp) protein (466aa)
Hypothetical transMembrane protein possibly involved in polysaccharide biosynthesis n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R048_BIFLM
transmembrane protein
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:CCK34406.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_008_241G1_scaffold_202_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13363..14025)
DNA (663bp) protein (221aa)
Putative acetyl transferase n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HZU8_BIFLN
Putative acetyl transferase {ECO:0000313|EMBL:CCK34405.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L1_008_241G1_scaffold_202_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14110..15054)
DNA (945bp) protein (315aa)
O-Antigen Polymerase family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HZI5_BIFLN
O-Antigen Polymerase family protein {ECO:0000313|EMBL:CCK34404.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_008_241G1_scaffold_202_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15377..16519)
DNA (1143bp) protein (381aa)
Glycosyl transferase, Group 1 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R050_BIFLM
group 1 glycosyl transferase
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:CCK34403.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_008_241G1_scaffold_202_19
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16532..17365)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AW15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ30598.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
short-chain dehydrogenase
L1_008_241G1_scaffold_202_20
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17398..19182)
DNA (1785bp) protein (595aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|SAAS:SAAS00056887}; EC=2.2.1.- {ECO:0000256|SAAS:SAAS00275386};; EC=2.2.1.9 {ECO:0000256|SAAS:SAAS00056850};; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
Possible decarboxylase with TPP domain+d236 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R053_BIFLM
decarboxylase
L1_008_241G1_scaffold_202_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19199..20344)
DNA (1146bp) protein (382aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R054_BIFLM
hypothetical protein
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:CCK34401.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_008_241G1_scaffold_202_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20341..21057)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AST7_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI98089.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_008_241G1_scaffold_202_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21187..22665)
DNA (1479bp) protein (493aa)
Possible Etk-like tyrosine kinase involved in EPs Biosynthesis n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R056_BIFLM
etk-like tyrosine kinase
Capsular exopolysaccharide family domain protein {ECO:0000313|EMBL:CCK34399.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_008_241G1_scaffold_202_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22726..24681)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=T2I081_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:CCK34398.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L1_008_241G1_scaffold_202_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24734..26401)
DNA (1668bp) protein (556aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein {ECO:0000313|EMBL:CCK34397.1}; EC=2.7.8.6 {ECO:0000313|EMBL:CCK34397.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Galactosyl transferase CpsD n=2 Tax=Bifidobacterium longum subsp. longum RepID=E4R058_BIFLM
galactosyl transferase cpsd
L1_008_241G1_scaffold_202_26

Not on your lists

27160..28749
DNA (1590bp) protein (530aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZDZ9_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61553.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
transporter
L1_008_241G1_scaffold_202_27
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28848..30215)
DNA (1368bp) protein (456aa)
H(+)-stimulated manganese uptake system protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NDH7_9BIFI
manganese transporter
H(+)-stimulated manganese uptake system protein {ECO:0000313|EMBL:CCY95222.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_008_241G1_scaffold_202_28
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30473..31843
DNA (1371bp) protein (457aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XWR4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFV38022.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Predicted ATPase (AAA+ superfamily)
L1_008_241G1_scaffold_202_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31847..32590)
DNA (744bp) protein (248aa)
PF07510 family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B1Y6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK70966.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_008_241G1_scaffold_202_30
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32594..33463)
DNA (870bp) protein (290aa)
2,5-diketo-D-gluconic acid reductase n=3 Tax=Bifidobacterium RepID=V6XUI5_BIFLN
Aldo/keto reductase {ECO:0000313|EMBL:EFV38020.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
dehydrogenase or reductase protein
Displaying 30 items

View Taxonomy