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L1_008_241G1_scaffold_228

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_228_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..1340)
DNA (1338bp) protein (446aa)
Outer membrane protein n=6 Tax=Bacteroides RepID=E5UWP7_9BACE
outer membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04266.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_241G1_scaffold_228_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1385..4510)
DNA (3126bp) protein (1042aa)
RND transporter, HAE1/HME family, permease protein n=2 Tax=Bacteroides RepID=C6Z141_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY76884.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
AcrB/AcrD/AcrF family transporter
L1_008_241G1_scaffold_228_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4510..5577)
DNA (1068bp) protein (356aa)
Efflux transporter, RND family, MFP subunit n=4 Tax=Bacteroides RepID=C6Z142_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KDS56353.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
lipoprotein
L1_008_241G1_scaffold_228_4
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5754..6632
DNA (879bp) protein (293aa)
Transcriptional regulator n=4 Tax=Bacteroides RepID=A6L7R1_BACV8
transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EET14602.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_008_241G1_scaffold_228_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6698..7462
DNA (765bp) protein (255aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L7R0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04262.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_241G1_scaffold_228_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7638..9626)
DNA (1989bp) protein (663aa)
glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Glucosamine-6-phosphate deaminase-like protein n=3 Tax=Bacteroides vulgatus RepID=D4V4L4_BACVU
L1_008_241G1_scaffold_228_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9630..10421)
DNA (792bp) protein (264aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Glucosamine-6-phosphate deaminase n=7 Tax=Bacteroides RepID=NAGB_BACV8
L1_008_241G1_scaffold_228_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10467..11702)
DNA (1236bp) protein (412aa)
Major facilitator family transporter n=7 Tax=Bacteroides RepID=A6L7Q7_BACV8
major facilitator family transporter
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KDS56358.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_241G1_scaffold_228_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11721..12917)
DNA (1197bp) protein (399aa)
Renin-binding protein-related protein n=2 Tax=Bacteroides vulgatus RepID=A6L7Q6_BACV8
renin-binding protein-related protein
Renin-binding protein-related protein {ECO:0000313|EMBL:ABR41720.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_241G1_scaffold_228_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12930..13844)
DNA (915bp) protein (305aa)
Dihydrodipicolinate synthetase family n=10 Tax=Bacteroides RepID=C3PVP0_9BACE
N-acetylneuraminate lyase
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:KDS31643.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_241G1_scaffold_228_11
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14150..15355
DNA (1206bp) protein (402aa)
ROK family protein n=13 Tax=Bacteroides RepID=C3R7S4_9BACE
xylose repressor
ROK family protein {ECO:0000313|EMBL:EEO59388.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L1_008_241G1_scaffold_228_12
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15470..16105
DNA (636bp) protein (212aa)
RNA polymerase ECF-type sigma factor n=4 Tax=Bacteroides RepID=A6L7Q3_BACV8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDF17732.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_241G1_scaffold_228_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16318..17400
DNA (1083bp) protein (361aa)
Sigma factor regulatory protein, FecR/PupR family n=4 Tax=Bacteroides RepID=D4V4M1_BACVU
anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:ABR41716.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_241G1_scaffold_228_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17548..21285
DNA (3738bp) protein (1246aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NYH3_9BACE
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR41715.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L1_008_241G1_scaffold_228_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21301..22890
DNA (1590bp) protein (530aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4M3_BACVU
Putative outer membrane protein {ECO:0000313|EMBL:KDS31648.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_008_241G1_scaffold_228_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22903..24147
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L7P9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR41713.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_241G1_scaffold_228_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24260..24994)
DNA (735bp) protein (245aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Bacteroides vulgatus RepID=D4V4M5_BACVU
beta-phosphoglucomutase
Putative beta-phosphoglucomutase {ECO:0000313|EMBL:KDS31650.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_241G1_scaffold_228_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25144..26487)
DNA (1344bp) protein (448aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4M6_BACVU
L1_008_241G1_scaffold_228_19
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26501..27496)
DNA (996bp) protein (332aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Glycerol-3-phosphate dehydrogenase n=7 Tax=Bacteroides RepID=A6L7P6_BACV8
glycerol-3-phosphate dehydrogenase
L1_008_241G1_scaffold_228_20
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27553..29283)
DNA (1731bp) protein (577aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=5 Tax=root RepID=C6Z154_9BACE
L1_008_241G1_scaffold_228_21
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29358..29966)
DNA (609bp) protein (203aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z155_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV66388.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
membrane protein
L1_008_241G1_scaffold_228_22
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30198..30740
DNA (543bp) protein (181aa)
Redoxin family protein n=4 Tax=Bacteroides RepID=C6Z156_9BACE
Redoxin family protein {ECO:0000313|EMBL:EET14615.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_008_241G1_scaffold_228_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30747..31607
DNA (861bp) protein (287aa)
N-acetylmuramoyl-L-alanine amidase n=8 Tax=root RepID=C6Z157_9BACE
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EOS04243.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_241G1_scaffold_228_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31694..33271)
DNA (1578bp) protein (526aa)
Rne/Rng family ribonuclease n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9U3Y5_BACVU
ribonuclease G
Rne/Rng family ribonuclease {ECO:0000313|EMBL:EIY76901.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_241G1_scaffold_228_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33510..33785)
DNA (276bp) protein (92aa)
DNA-binding protein HU n=15 Tax=Bacteroides RepID=A6L7P0_BACV8
DNA-binding protein HU
DNA-binding protein HU-beta {ECO:0000313|EMBL:EOS04241.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_241G1_scaffold_228_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33965..35023
DNA (1059bp) protein (353aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:KDS31659.1}; EC=3.2.2.- {ECO:0000313|EMBL:KDS31659.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
A/G-specific adenine glycosylase n=2 Tax=Bacteroides vulgatus RepID=A6L7N9_BACV8
A/G-specific adenine glycosylase
L1_008_241G1_scaffold_228_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35038..35505
DNA (468bp) protein (156aa)
Single-stranded DNA-binding protein n=2 Tax=Bacteroides vulgatus RepID=A6L7N8_BACV8
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_008_241G1_scaffold_228_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35611..36894
DNA (1284bp) protein (428aa)
Putative transmembrane CorC/HlyC family transporter associated protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L7N7_BACV8
CorC/HlyC family transporter associated protein
Putative transmembrane CorC/HlyC family transporter associated protein {ECO:0000313|EMBL:ABR41701.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_241G1_scaffold_228_29
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36903..37529
DNA (627bp) protein (209aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L7N6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66396.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_241G1_scaffold_228_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38000..39781)
DNA (1782bp) protein (594aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Two-component system sensor histidine kinase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L7N4_BACV8
two-component system sensor histidine kinase
Displaying items 1-30 of 44 in total

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