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L1_008_241G1_scaffold_236

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_236_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..1968
DNA (1968bp) protein (656aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046490}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046490};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8J2_BACVU
beta-glycosidase
L1_008_241G1_scaffold_236_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2010..3314
DNA (1305bp) protein (435aa)
Polygalacturonase (Pectinase) n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8J3_BACVU
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EFG17880.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
glycoside hydrolase
L1_008_241G1_scaffold_236_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3353..3445)
DNA (93bp) protein (31aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=G1UMI6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS03119.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_241G1_scaffold_236_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3466..4029)
DNA (564bp) protein (188aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L178_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS03120.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_241G1_scaffold_236_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4119..6584)
DNA (2466bp) protein (822aa)
Alanine racemase {ECO:0000313|EMBL:EFG17883.1}; EC=5.1.1.1 {ECO:0000313|EMBL:EFG17883.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Alanine racemase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8J6_BACVU
bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
L1_008_241G1_scaffold_236_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6560..7546)
DNA (987bp) protein (329aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L176_BACV8
hypothetical protein
GSCFA family protein {ECO:0000313|EMBL:KDS45536.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_241G1_scaffold_236_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7603..9537
DNA (1935bp) protein (645aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8J8_BACVU
L1_008_241G1_scaffold_236_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9550..10890
DNA (1341bp) protein (447aa)
Trk system K+ uptake protein TrkA n=7 Tax=Bacteroides RepID=A6L174_BACV8
trkA; potassium transporter peripheral membrane protein
NAD(P)-binding family protein {ECO:0000313|EMBL:KDS45538.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_241G1_scaffold_236_9
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10890..12344
DNA (1455bp) protein (485aa)
Trk system K+ uptake protein TrkH n=4 Tax=Bacteroides RepID=A6L173_BACV8
Trk system K+ uptake protein TrkH
Trk system K+ uptake protein TrkH {ECO:0000313|EMBL:EFV65212.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_241G1_scaffold_236_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12447..12824
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8K1_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG17888.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L1_008_241G1_scaffold_236_11
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12928..13278
DNA (351bp) protein (117aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
NADH-quinone oxidoreductase subunit A n=15 Tax=Bacteroides RepID=NUOA_BACV8
NADH dehydrogenase I subunit A
L1_008_241G1_scaffold_236_12
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13269..13865
DNA (597bp) protein (199aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
NADH-quinone oxidoreductase subunit B n=7 Tax=Bacteroides RepID=NUOB_BACV8
NADH dehydrogenase subunit B
L1_008_241G1_scaffold_236_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13862..15421
DNA (1560bp) protein (520aa)
NADH-quinone oxidoreductase subunit C/D {ECO:0000256|HAMAP-Rule:MF_01397}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01397};; NADH dehydrogenase I subunit C/D {ECO:0000256|HAMAP-Rule:MF_01397}; NDH-1 subunit C/D {ECO:0000256|HAMAP-Rule:MF_01397}; NUO3/NUO4 {ECO:0000256|HAMAP-Rule:MF_01397}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
NADH-quinone oxidoreductase subunit C/D n=7 Tax=Bacteroides RepID=NUOCD_BACV8
NADH dehydrogenase I subunit D
L1_008_241G1_scaffold_236_14
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15545..16621
DNA (1077bp) protein (359aa)
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
NADH-quinone oxidoreductase subunit H n=14 Tax=Bacteroides RepID=NUOH_BACV8
L1_008_241G1_scaffold_236_15
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16621..17073
DNA (453bp) protein (151aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
NADH-quinone oxidoreductase subunit I n=15 Tax=Bacteroides RepID=A6L167_BACV8
NADH dehydrogenase
L1_008_241G1_scaffold_236_16
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17089..17592
DNA (504bp) protein (168aa)
NADH dehydrogenase I, chain J n=13 Tax=Bacteroides RepID=A6L166_BACV8
NADH dehydrogenase
NADH dehydrogenase I chain J {ECO:0000313|EMBL:CDF19313.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_241G1_scaffold_236_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17598..17906
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
NADH-quinone oxidoreductase subunit K n=14 Tax=Bacteroides RepID=A6L165_BACV8
NADH-quinone oxidoreductase subunit K
L1_008_241G1_scaffold_236_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17909..19810
DNA (1902bp) protein (634aa)
Putative NAD(P)H-quinone oxidoreductase subunit F n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8K9_BACVU
Putative NAD(P)H-quinone oxidoreductase subunit F {ECO:0000313|EMBL:EFG17896.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
NADH dehydrogenase chain L
L1_008_241G1_scaffold_236_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19864..21345
DNA (1482bp) protein (494aa)
NADH dehydrogenase I chain M n=6 Tax=Bacteroides RepID=A6L163_BACV8
NADH dehydrogenase I subunit M
Proton-translocating NADH-quinone oxidoreductase, chain M {ECO:0000313|EMBL:EIY80725.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_241G1_scaffold_236_20
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21376..22797
DNA (1422bp) protein (474aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
NADH-quinone oxidoreductase subunit N n=5 Tax=Bacteroides RepID=C6Z6L4_9BACE
NADH dehydrogenase I subunit N
L1_008_241G1_scaffold_236_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22973..24199
DNA (1227bp) protein (409aa)
Glycoside hydrolase family 88, candidate delta-4,5 unsaturated glucuronyl hydrolase n=2 Tax=Bacteroides vulgatus RepID=A6L161_BACV8
delta\-4\,5\ unsaturated\ glucuronyl\ hydrolase
Glycosyl Hydrolase Family 88 family protein {ECO:0000313|EMBL:KDS26710.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_241G1_scaffold_236_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24201..24443)
DNA (243bp) protein (81aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6Z6L6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY80728.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
two-component system sensor histidine kinase
L1_008_241G1_scaffold_236_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24878..26284
DNA (1407bp) protein (469aa)
Glycoside hydrolase family 28, candidate polygalacturonase n=2 Tax=Bacteroides vulgatus RepID=A6L159_BACV8
polygalacturonase
Glycoside hydrolase family 28, candidate polygalacturonase {ECO:0000313|EMBL:ABR39423.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_241G1_scaffold_236_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26348..27598)
DNA (1251bp) protein (417aa)
CobW/P47K family protein n=2 Tax=Bacteroides RepID=D4V8L5_BACVU
CobW/P47K family protein {ECO:0000313|EMBL:EFG17902.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L1_008_241G1_scaffold_236_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27747..29072
DNA (1326bp) protein (442aa)
Glycoside hydrolase family 29 n=3 Tax=root RepID=A6L157_BACV8
glycoside hydrolase
Alpha-L-fucosidase {ECO:0000313|EMBL:EFG17903.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_008_241G1_scaffold_236_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29803..30384
DNA (582bp) protein (194aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8L7_BACVU
Putative lipoprotein {ECO:0000313|EMBL:EFG17904.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
Displaying 26 items

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