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L1_008_241G1_scaffold_246

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_246_1
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..166
DNA (165bp) protein (55aa)
eno; Enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
Enolase n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0E1_BIFLN
L1_008_241G1_scaffold_246_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

257..841
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZDW7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74606.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
putative membrane spanning protein with septum formation initiator domain
L1_008_241G1_scaffold_246_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

838..1404
DNA (567bp) protein (189aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BNM7_BIFBR
Hypothetical protein with DUF501 domain
Uncharacterized protein {ECO:0000313|EMBL:EFE89264.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_241G1_scaffold_246_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1463..2464
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZCX8_BIFBR
phosphatase
Uncharacterized protein {ECO:0000313|EMBL:EPD74608.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_246_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2704..3273
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E0T0_BIFBR
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:ERI87657.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_241G1_scaffold_246_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3405..4862
DNA (1458bp) protein (486aa)
L-serine ammonia-lyase {ECO:0000313|EMBL:AEF28060.1}; EC=4.3.1.17 {ECO:0000313|EMBL:AEF28060.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L-serine ammonia-lyase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6CA67_BIFBA
L-serine dehydratase
L1_008_241G1_scaffold_246_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4923..5330
DNA (408bp) protein (136aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Peptidyl-prolyl cis-trans isomerase n=5 Tax=Bifidobacterium breve RepID=F9XYG6_BIFBU
Peptidyl-prolyl cis-trans isomerase
L1_008_241G1_scaffold_246_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5428..5907
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=4 Tax=Bifidobacterium breve RepID=F6CA65_BIFBA
Transcription elongation factor greA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_246_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5992..6936)
DNA (945bp) protein (315aa)
hemolysin III n=1 Tax=Bifidobacterium breve RepID=UPI00036BDE85
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27381.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_246_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7099..8586
DNA (1488bp) protein (496aa)
Sensor histidine kinase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KYB4_BIFBR
Sensory transduction protein kinase
Sensory transduction protein kinase {ECO:0000313|EMBL:AHJ20916.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_246_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8646..8924)
DNA (279bp) protein (93aa)
Transcriptional regulator WhiB n=6 Tax=Bifidobacterium breve RepID=F6CA62_BIFBA
Cell division transcription factor WhmD
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_241G1_scaffold_246_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9039..10757)
DNA (1719bp) protein (573aa)
DNA segregation ATPase and related proteins (FtsK/SpoIIIE family) n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYH1_BIFBU
DNA segregation ATPase and related proteins (FtsK/SpoIIIE family) {ECO:0000313|EMBL:ABE95422.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
DNA segregation ATPase and related proteins (FtsK/SpoIIIE family)
L1_008_241G1_scaffold_246_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10961..11953)
DNA (993bp) protein (331aa)
Cell envelope-like function transcriptional attenuator common domain protein n=3 Tax=Bifidobacterium breve RepID=F6CA60_BIFBA
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABE95423.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_241G1_scaffold_246_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12556..12855
DNA (300bp) protein (100aa)
Transcriptional regulator WhiB n=6 Tax=Bifidobacterium breve RepID=F6CA58_BIFBA
Transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_246_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12901..15996
DNA (3096bp) protein (1032aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYH4_BIFBU
Conserved hypothetical membrane spanning protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE95425.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_241G1_scaffold_246_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15993..17534
DNA (1542bp) protein (514aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZJT1_BIFBR
putative secreted protein
Uncharacterized protein {ECO:0000313|EMBL:EPD74620.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_246_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17556..17957)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6CA55_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27743.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_246_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18070..18873
DNA (804bp) protein (268aa)
Putative eukaryotic phosphomannomutase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6CA54_BIFBA
eukaryotic phosphomannomutase-like protein
Putative eukaryotic phosphomannomutase {ECO:0000313|EMBL:AEF27974.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_246_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18909..19619
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZCZ5_BIFBR
Hypothetical protein with phosphoribosylpyrophosphate transferase domain
Uncharacterized protein {ECO:0000313|EMBL:EPD74623.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_246_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19677..20750)
DNA (1074bp) protein (358aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Bifidobacterium breve RepID=F6CA52_BIFBA
Sensory transduction protein kinase
L1_008_241G1_scaffold_246_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20750..21472)
DNA (723bp) protein (241aa)
DNA-binding response regulator MtrA n=2 Tax=Bifidobacterium breve RepID=H3KYH9_BIFBR
Putative DNA-binding response regulator MtrA {ECO:0000313|EMBL:ERI87640.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
mtrA; DNA-binding response regulator MtrA
L1_008_241G1_scaffold_246_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21503..23755)
DNA (2253bp) protein (751aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
glgB; 1,4-alpha-glucan branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=2 Tax=Bifidobacterium breve RepID=F9XYI1_BIFBU
L1_008_241G1_scaffold_246_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23933..24526
DNA (594bp) protein (198aa)
CarD-like protein n=6 Tax=Bifidobacterium breve RepID=F6CA49_BIFBA
CarD-like transcriptional regulator
CarD-like protein {ECO:0000313|EMBL:AEF27623.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_246_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24523..25038
DNA (516bp) protein (172aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Bifidobacterium breve RepID=D4BNP9_BIFBR
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L1_008_241G1_scaffold_246_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25112..25945)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AEI2_BIFBR
Permease protein of ABC transporter system for metals
Uncharacterized protein {ECO:0000313|EMBL:EPD74629.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_246_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26036..26908)
DNA (873bp) protein (291aa)
ATP-binding protein of ABC transporter system for metals n=6 Tax=Bifidobacterium breve RepID=F9XYI5_BIFBU
ATP-binding protein of ABC transporter system for metals
Uncharacterized protein {ECO:0000313|EMBL:EPD74630.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_246_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27066..28238)
DNA (1173bp) protein (391aa)
Solute-binding protein of ABC transporter system for metals n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYI6_BIFBU
Solute-binding protein of ABC transporter system for metals
Solute-binding protein of ABC transporter system for metals {ECO:0000313|EMBL:ABE95437.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_241G1_scaffold_246_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28343..29221
DNA (879bp) protein (293aa)
Bifunctional protein FolD n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZX22_BIFBR
Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_246_29
unknown

Not on your lists

29218..29364
DNA (147bp) protein (49aa)

This feature has no annotations

L1_008_241G1_scaffold_246_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


29475..29588
DNA (114bp) protein (38aa)
30S ribosomal protein S1 n=6 Tax=Bifidobacterium breve RepID=F6CA43_BIFBA
rpsA; SSU ribosomal protein S1P
SSU ribosomal protein S1P {ECO:0000313|EMBL:AHJ20935.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying 30 items

View Taxonomy