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L1_008_241G1_scaffold_272

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_272_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..305)
DNA (303bp) protein (101aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Bifidobacterium breve RepID=UPI000310115F
Ribonucleoside-diphosphate reductase alpha chain
L1_008_241G1_scaffold_272_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(314..814)
DNA (501bp) protein (167aa)
NrdI protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A269_BIFBR
NrdI protein
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_272_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(811..1077)
DNA (267bp) protein (89aa)
Glutaredoxin nrdH n=2 Tax=Bifidobacterium breve RepID=F9XZY2_BIFBU
Glutaredoxin nrdH
Glutaredoxin nrdH {ECO:0000313|EMBL:AHJ20243.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_241G1_scaffold_272_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1628..2281)
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3AIW7_BIFBR
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EPD76279.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_272_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2274..4775)
DNA (2502bp) protein (834aa)
Beta-glucosidase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L298_BIFBR
Beta-glucosidase {ECO:0000313|EMBL:AHJ22075.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Beta-glucosidase
L1_008_241G1_scaffold_272_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5074..5724)
DNA (651bp) protein (217aa)
DNA-binding helix-turn-helix protein n=2 Tax=Bifidobacterium breve RepID=F6C8Z5_BIFBA
Hypothetical protein with helix-turn-helix motif
Uncharacterized protein {ECO:0000313|EMBL:AHJ22076.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_272_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5705..6388)
DNA (684bp) protein (228aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C8Z6_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27327.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_272_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6624..7148
DNA (525bp) protein (175aa)
Ion channel n=2 Tax=Bifidobacterium breve RepID=F6C8Z7_BIFBA
Potassium channel protein
Ion channel {ECO:0000313|EMBL:AEF27210.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_272_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7273..10176)
DNA (2904bp) protein (968aa)
Beta-glucosidase {ECO:0000313|EMBL:ABE96569.1}; EC=3.2.1.21 {ECO:0000313|EMBL:ABE96569.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Glycosyl hydrolase family 3 N-terminal domain protein n=2 Tax=Bifidobacterium breve RepID=F6C8Z8_BIFBA
Beta-glucosidase
L1_008_241G1_scaffold_272_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10632..12824
DNA (2193bp) protein (731aa)
protein kinase n=1 Tax=Bifidobacterium breve RepID=UPI00036E0E0F
Serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABE96570.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_241G1_scaffold_272_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12937..13740
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CR35_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20246.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_241G1_scaffold_272_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14262..15752
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHR9_BIFBR
Hypothetical secreted protein with G5 and DUF348 domains
Uncharacterized protein {ECO:0000313|EMBL:EPD76288.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_272_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


15773..16702
DNA (930bp) protein (310aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CPR7_BIFBR
Dimethyladenosine transferase
L1_008_241G1_scaffold_272_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16699..17646
DNA (948bp) protein (316aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C976_BIFBA
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L1_008_241G1_scaffold_272_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17692..18321
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C977_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ22084.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_272_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18450..19856)
DNA (1407bp) protein (469aa)
tRNA adenylyltransferase {ECO:0000313|EMBL:AEF28080.1}; EC=2.7.7.72 {ECO:0000313|EMBL:AEF28080.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
tRNA nucleotidyltransferase n=2 Tax=Bifidobacterium breve RepID=F9XZZ5_BIFBU
tRNA nucleotidyltransferase
L1_008_241G1_scaffold_272_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19955..20926
DNA (972bp) protein (324aa)
Mutator mutT protein n=2 Tax=Bifidobacterium breve RepID=F6C979_BIFBA
Phosphohydrolase (MutT/nudix family protein)
Mutator mutT protein {ECO:0000313|EMBL:EPD76293.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_272_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20884..23076
DNA (2193bp) protein (731aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI0003676683
putative secreted protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:ABE96578.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_241G1_scaffold_272_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23073..26852
DNA (3780bp) protein (1260aa)
Integral membrane protein MviN n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZPJ6_BIFBR
putative membrane spanning protein with virulence factor mviN domain
Putative membrane spanning protein with virulence factor mviN domain {ECO:0000313|EMBL:AHJ22088.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_272_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27054..28073
DNA (1020bp) protein (340aa)
Thioredoxin-disulfide reductase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2B2_BIFBR
Thioredoxin reductase
Thioredoxin reductase {ECO:0000313|EMBL:AHJ20255.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_241G1_scaffold_272_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28190..29455)
DNA (1266bp) protein (422aa)
ParB-like partition protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A285_BIFBR
ParB-like partition protein {ECO:0000313|EMBL:EPD76297.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Chromosome partitioning protein parB
L1_008_241G1_scaffold_272_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29455..30423)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHS7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76298.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
parA3; Chromosome partitioning protein parA
L1_008_241G1_scaffold_272_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30676..31341)
DNA (666bp) protein (222aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Ribosomal RNA small subunit methyltransferase G n=5 Tax=Bifidobacterium breve RepID=F6C985_BIFBA
Methyltransferase gidB (Glucose inhibited division protein B)
L1_008_241G1_scaffold_272_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31465..32001)
DNA (537bp) protein (179aa)
R3H domain protein n=3 Tax=Bifidobacterium breve RepID=F6C986_BIFBA
Jag protein
Uncharacterized protein {ECO:0000313|EMBL:EPD76300.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_272_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32124..33134)
DNA (1011bp) protein (337aa)
Inner membrane protein (Preprotein translocase subunit YidC) n=4 Tax=Bifidobacterium breve RepID=F9Y0F6_BIFBU
Inner membrane protein (Preprotein translocase subunit YidC)
Inner membrane protein (Preprotein translocase subunit YidC) {ECO:0000313|EMBL:AHJ22094.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_272_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33452..33802)
DNA (351bp) protein (117aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Ribonuclease P protein component n=4 Tax=Bifidobacterium breve RepID=F6C988_BIFBA
Ribonuclease P protein component
L1_008_241G1_scaffold_272_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(33834..33968)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=5 Tax=Bifidobacterium breve RepID=F6C989_BIFBA
LSU ribosomal protein L34P
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_272_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34287..35753
DNA (1467bp) protein (489aa)
Chromosomal replication initiator protein DnaA n=6 Tax=Bifidobacterium breve RepID=F6C5B2_BIFBA
Chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_272_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36330..37454
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
DNA polymerase III subunit beta n=5 Tax=Bifidobacterium breve RepID=F6C5B3_BIFBA
DNA polymerase III, beta chain
L1_008_241G1_scaffold_272_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37530..38636
DNA (1107bp) protein (369aa)
DNA replication and repair protein RecF n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZC4_BIFBU
recF; DNA replication and repair protein recF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|SAAS:SAAS00122784}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Displaying items 1-30 of 45 in total

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