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L1_008_241G1_scaffold_275

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_275_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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720..974
DNA (255bp) protein (85aa)
NIL domain protein n=2 Tax=Bifidobacterium RepID=C5EDZ4_BIFLI
NIL domain protein {ECO:0000313|EMBL:EEQ56238.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
abcC1; abcc1
L1_008_241G1_scaffold_275_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1140..1409
DNA (270bp) protein (90aa)
MetC2 n=9 Tax=Bifidobacterium RepID=E4R1G5_BIFLM
metC2; metc2
Cys/Met metabolism PLP-dependent enzyme domain protein {ECO:0000313|EMBL:EIJ26349.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_241G1_scaffold_275_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1569..2492
DNA (924bp) protein (308aa)
Membrane protease-like protein n=15 Tax=Bifidobacterium RepID=B3DQ49_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN23949.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_008_241G1_scaffold_275_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2683..3528)
DNA (846bp) protein (282aa)
Patatin-like phospholipase n=3 Tax=Bifidobacterium RepID=E5XVP7_9BIFI
phospholipase
Phospholipase {ECO:0000313|EMBL:AIW44021.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_008_241G1_scaffold_275_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3657..4451)
DNA (795bp) protein (265aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Glutamate racemase n=15 Tax=Bifidobacterium RepID=MURI_BIFLD
murI; glutamate racemase
L1_008_241G1_scaffold_275_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4559..5452
DNA (894bp) protein (298aa)
Diaminopimelate epimerase {ECO:0000256|SAAS:SAAS00028055, ECO:0000313|EMBL:CBK69773.1}; EC=5.1.1.7 {ECO:0000256|SAAS:SAAS00028063, ECO:0000313|EMBL:CBK69773.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Diaminopimelate epimerase n=8 Tax=Bifidobacterium RepID=B3DQ52_BIFLD
diaminopimelate epimerase
L1_008_241G1_scaffold_275_7
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5458..6075)
DNA (618bp) protein (206aa)
Vitamin K epoxide reductase n=3 Tax=Bifidobacterium RepID=V6XXI9_BIFLN
Predicted membrane protein {ECO:0000313|EMBL:CCY95098.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L1_008_241G1_scaffold_275_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6077..6325
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:BAP83936.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_008_241G1_scaffold_275_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6333..7226
DNA (894bp) protein (298aa)
Predicted metal-dependent phosphoesterases (PHP family) n=8 Tax=Bifidobacterium RepID=D6DBA0_BIFLN
hypothetical protein
Predicted metal-dependent phosphoesterases (PHP family) {ECO:0000313|EMBL:CBK69771.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_008_241G1_scaffold_275_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7287..7511)
DNA (225bp) protein (75aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DQ55_BIFLD
Protein of unknown function (DUF3107).
Putative ATP-binding protein {ECO:0000313|EMBL:CCK35314.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_008_241G1_scaffold_275_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7660..9315)
DNA (1656bp) protein (552aa)
Putative aminoglycoside phosphotransferase n=2 Tax=Bifidobacterium longum subsp. longum RepID=E4R1H3_BIFLM
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ67022.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
aminoglycoside phosphotransferase
L1_008_241G1_scaffold_275_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9461..11035
DNA (1575bp) protein (525aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
UvrD/REP helicase N-terminal domain protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MZN0_9BIFI
DNA helicase II
L1_008_241G1_scaffold_275_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11105..12850)
DNA (1746bp) protein (582aa)
Hydrolase domain protein n=7 Tax=Bifidobacterium RepID=I3AWI6_BIFLN
Hydrolase domain protein {ECO:0000313|EMBL:EIJ26357.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L1_008_241G1_scaffold_275_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13071..13952
DNA (882bp) protein (294aa)
Predicted secreted protein containing a PDZ domain n=4 Tax=Bifidobacterium RepID=D6DB96_BIFLN
Predicted secreted protein containing a PDZ domain
Hypothetical secreted protein {ECO:0000313|EMBL:ACD97558.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_241G1_scaffold_275_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14068..14484
DNA (417bp) protein (139aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=B3DQ60_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44012.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_008_241G1_scaffold_275_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14953..16656
DNA (1704bp) protein (568aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=B3DQ61_BIFLD
DivIVA domain repeat protein {ECO:0000313|EMBL:CBK69765.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
DivIVA domain repeat protein
L1_008_241G1_scaffold_275_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16653..17843
DNA (1191bp) protein (397aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=3 Tax=Bacteria RepID=DXR_BIFLD
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
L1_008_241G1_scaffold_275_18
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17840..19063
DNA (1224bp) protein (408aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=12 Tax=Bifidobacterium RepID=D6DB93_BIFLN
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L1_008_241G1_scaffold_275_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19184..20896
DNA (1713bp) protein (571aa)
Esterase/lipase n=4 Tax=Bacteria RepID=B3DQ64_BIFLD
Esterase/lipase {ECO:0000313|EMBL:ACD97563.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
hypothetical protein
L1_008_241G1_scaffold_275_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20945..21664
DNA (720bp) protein (240aa)
DNA repair protein RecO n=11 Tax=Bacteria RepID=RECO_BIFLD
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_008_241G1_scaffold_275_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21661..22455
DNA (795bp) protein (265aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Isoprenyl transferase n=16 Tax=Bacteria RepID=ISPT_BIFLO
uppS; undecaprenyl pyrophosphate synthase
L1_008_241G1_scaffold_275_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22724..23956)
DNA (1233bp) protein (411aa)
Inosine-uridine preferring nucleoside hydrolase n=2 Tax=Bifidobacterium longum subsp. longum RepID=F8AUE2_BIFLN
inosine-uridine preferring nucleoside hydrolase
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:AEI97153.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_008_241G1_scaffold_275_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24080..25150)
DNA (1071bp) protein (357aa)
Possible solute binding protein of ABC transporter n=2 Tax=Bifidobacterium longum RepID=Q8G7Y1_BIFLO
ABC transporter substrate-binding protein
Possible solute binding protein of ABC transporter {ECO:0000313|EMBL:BAP83921.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_008_241G1_scaffold_275_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25409..26191)
DNA (783bp) protein (261aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=10 Tax=Bifidobacterium RepID=D6DB86_BIFLN
ABC transporter permease
Putative ABC transporter permease component {ECO:0000313|EMBL:BAJ67009.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_241G1_scaffold_275_25

Not on your lists

comp(26387..26908)
DNA (522bp) protein (174aa)
Putative sucrose-6-phosphate hydrolase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AWG3_BIFLN
beta-fructofuranosidase
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:CCG34806.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 25 items

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