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L1_008_241G1_scaffold_276

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_276_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..216
DNA (216bp) protein (72aa)
MotA/TolQ/ExbB proton channel n=4 Tax=Bacteroides RepID=Q8A4D1_BACTN
MotA/TolQ/ExbB proton channel
Uncharacterized protein {ECO:0000313|EMBL:EIY16088.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_241G1_scaffold_276_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

246..851
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZBN4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21903.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
outer membrane transport energization protein ExbD (TC 2.C.1.1.1)
L1_008_241G1_scaffold_276_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

867..1520
DNA (654bp) protein (218aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZBN5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73595.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Biopolymer transport protein ExbD/TolR.
L1_008_241G1_scaffold_276_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1547..2362
DNA (816bp) protein (272aa)
TonB-dependent receptor n=2 Tax=Bacteroides caccae RepID=A5ZBN6_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:EDM21905.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
outer membrane transport energization protein TonB (TC 2.C.1.1.1)
L1_008_241G1_scaffold_276_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2367..3314
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U684_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73593.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
phosphate ABC transporter substrate-binding protein
L1_008_241G1_scaffold_276_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3335..4801
DNA (1467bp) protein (489aa)
Tetratricopeptide repeat protein n=3 Tax=Bacteroides RepID=A5ZBN8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73592.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_241G1_scaffold_276_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4974..5819
DNA (846bp) protein (282aa)
ABC transporter, ATP-binding protein n=2 Tax=Bacteroides caccae RepID=A5ZBN9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16094.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC-type multidrug transport system, ATPase component
L1_008_241G1_scaffold_276_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5826..6677
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZBP0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16095.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_241G1_scaffold_276_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6689..7057
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=2 Tax=Bacteroides caccae RepID=A5ZBP1_9BACE
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDM21910.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcriptional regulator, GntR family
L1_008_241G1_scaffold_276_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7068..7874
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZBP2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16097.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_241G1_scaffold_276_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7943..9580)
DNA (1638bp) protein (546aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Alpha-galactosidase n=2 Tax=Bacteroides caccae RepID=A5ZBP3_9BACE
alpha-galactosidase
L1_008_241G1_scaffold_276_12
unknown

Not on your lists

10031..10204
DNA (174bp) protein (58aa)

This feature has no annotations

L1_008_241G1_scaffold_276_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10588..12198)
DNA (1611bp) protein (537aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8UPW2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16245.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Amino acid transporters
L1_008_241G1_scaffold_276_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12415..13191
DNA (777bp) protein (259aa)
Ion channel n=3 Tax=Bacteroides RepID=A5ZBP8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16246.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
potassium channel subunit
L1_008_241G1_scaffold_276_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13299..13694)
DNA (396bp) protein (132aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L-glutaminase (EC:3.5.1.2)
Glutaminase n=3 Tax=Bacteroides RepID=A5ZBP9_9BACE
L1_008_241G1_scaffold_276_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13734..14306)
DNA (573bp) protein (191aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L-glutaminase (EC:3.5.1.2)
Glutaminase n=3 Tax=Bacteroides RepID=A5ZBP9_9BACE
L1_008_241G1_scaffold_276_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14275..15717)
DNA (1443bp) protein (481aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Glutamate decarboxylase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UFX5_9BACE
glutamate decarboxylase
L1_008_241G1_scaffold_276_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16058..16561)
DNA (504bp) protein (168aa)
Sigma-70 region 2 n=3 Tax=Bacteroides caccae RepID=A5ZBQ1_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:EDM21920.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RNA polymerase ECF-type sigma factor
L1_008_241G1_scaffold_276_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16673..16783)
DNA (111bp) protein (37aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZBQ2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74389.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_241G1_scaffold_276_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16883..18112
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UTA9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16252.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
sugar transporter
L1_008_241G1_scaffold_276_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18115..19035
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I9PJ44_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16253.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
permease
L1_008_241G1_scaffold_276_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19112..19504)
DNA (393bp) protein (131aa)
Histidine triad domain protein n=3 Tax=Bacteroides RepID=A5ZBQ5_9BACE
Histidine triad domain protein {ECO:0000313|EMBL:EDM21924.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L1_008_241G1_scaffold_276_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19556..20086)
DNA (531bp) protein (177aa)
Transcription elongation factor GreA n=3 Tax=Bacteroides RepID=A5ZBQ6_9BACE
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcription elongation factor GreA
L1_008_241G1_scaffold_276_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20202..21353)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UFD9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74394.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
AhpC/TSA family.
L1_008_241G1_scaffold_276_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21550..23676
DNA (2127bp) protein (709aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=3 Tax=Bacteroides RepID=A5ZBQ8_9BACE
L1_008_241G1_scaffold_276_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23780..23959)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PJ49_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16258.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_241G1_scaffold_276_27
unknown

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comp(24484..24654)
DNA (171bp) protein (57aa)

This feature has no annotations

L1_008_241G1_scaffold_276_28
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24890..26872
DNA (1983bp) protein (661aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AKU5_9BACE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDA49414.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
putative outer membrane protein
Displaying 28 items

View Taxonomy