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L1_008_241G1_scaffold_322

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_322_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(49..600)
DNA (552bp) protein (184aa)
ATP synthase subunit delta n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T260_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
ATP synthase F1 subunit delta
L1_008_241G1_scaffold_322_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(663..1022)
DNA (360bp) protein (120aa)
ATP synthase subunit b n=2 Tax=Veillonella parvula RepID=D1BPA5_VEIPT
ATP synthase F0 subunit beta
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L1_008_241G1_scaffold_322_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1015..1161)
DNA (147bp) protein (49aa)
ATP synthase F0, C subunit n=8 Tax=Veillonella RepID=D1BPA6_VEIPT
ATP synthase F0 C subunit
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L1_008_241G1_scaffold_322_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1185..1877)
DNA (693bp) protein (231aa)
ATP synthase subunit a n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BPA7_VEIPT
ATP synthase F0 subunit alpha
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L1_008_241G1_scaffold_322_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2060..2428)
DNA (369bp) protein (123aa)
ATP synthase I superfamily n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQG4_9FIRM
ATP synthase I superfamily {ECO:0000313|EMBL:ETI98930.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ATP synthase I
L1_008_241G1_scaffold_322_6
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2439..2633)
DNA (195bp) protein (65aa)
ATP synthase protein I n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQG3_9FIRM
hypothetical protein
ATP synthase protein I {ECO:0000313|EMBL:EFG23204.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L1_008_241G1_scaffold_322_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2635..3777)
DNA (1143bp) protein (381aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EQC65107.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EQC65107.1};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T263_9FIRM
UDP-N-acetylglucosamine 2-epimerase
L1_008_241G1_scaffold_322_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3835..4986)
DNA (1152bp) protein (384aa)
Glycosyltransferase, group 4 family {ECO:0000313|EMBL:EGL77629.1}; EC=2.7.8.- {ECO:0000313|EMBL:EGL77629.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Glycosyltransferase, group 4 family n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KZF1_9FIRM
glycosyl transferase family protein
L1_008_241G1_scaffold_322_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5021..6379)
DNA (1359bp) protein (453aa)
UPF0210 protein HMPREF1035_0852 n=2 Tax=Veillonella parvula ATCC 17745 RepID=D1YQ28_9FIRM
UPF0210 protein HMPREF1035_0852 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
hypothetical protein
L1_008_241G1_scaffold_322_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6388..6663)
DNA (276bp) protein (92aa)
UPF0237 protein HMPREF1035_0851 n=4 Tax=Veillonella RepID=D1YQ27_9FIRM
UPF0237 protein Q619_VDC00526G0013 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ACT domain-containing protein
L1_008_241G1_scaffold_322_11
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6798..8435)
DNA (1638bp) protein (546aa)
Phosphoglucomutase, alpha-D-glucose phosphate-specific n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQG0_9FIRM
Phosphoglucomutase, alpha-D-glucose phosphate-specific {ECO:0000313|EMBL:EFG25008.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
L1_008_241G1_scaffold_322_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8607..9551)
DNA (945bp) protein (315aa)
Uncharacterized protein n=2 Tax=Veillonella RepID=T0T271_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQC65112.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
hypothetical protein
L1_008_241G1_scaffold_322_13
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9757..10653
DNA (897bp) protein (299aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQF8_9FIRM
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L1_008_241G1_scaffold_322_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10650..11342
DNA (693bp) protein (231aa)
Transcriptional regulator, GntR family n=5 Tax=Veillonella RepID=D1BPB7_VEIPT
GntR family transcriptional regulator
FCD domain protein {ECO:0000313|EMBL:EGL77673.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L1_008_241G1_scaffold_322_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11481..12941
DNA (1461bp) protein (487aa)
Amino acid carrier protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQ22_9FIRM
Putative amino acid carrier protein {ECO:0000313|EMBL:EQC65115.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
amino acid carrier protein
L1_008_241G1_scaffold_322_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13301..14557
DNA (1257bp) protein (419aa)
Glutamate dehydrogenase n=2 Tax=Veillonella RepID=T0T1U3_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Glu/Leu/Phe/Val dehydrogenase
L1_008_241G1_scaffold_322_17
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14699..15190)
DNA (492bp) protein (164aa)
Conserved hypothetical, predicted membrane protein (TMS5) n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQF4_9FIRM
Conserved hypothetical, predicted membrane protein (TMS5) {ECO:0000313|EMBL:EFG25002.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
hypothetical protein
L1_008_241G1_scaffold_322_18
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15661..16350)
DNA (690bp) protein (230aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
7-cyano-7-deazaguanine synthase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQF3_9FIRM
exsB protein
L1_008_241G1_scaffold_322_19
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16419..17174)
DNA (756bp) protein (252aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EQC65119.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EQC65119.1};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Exodeoxyribonuclease III Xth n=4 Tax=Veillonella RepID=D1BPC2_VEIPT
exodeoxyribonuclease III Xth
L1_008_241G1_scaffold_322_20

Not on your lists

comp(17325..17552)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ26198.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_241G1_scaffold_322_21
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17566..18384)
DNA (819bp) protein (273aa)
Rhodanese domain protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQF0_9FIRM
Rhodanese domain protein {ECO:0000313|EMBL:EFG24998.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
rhodanese
L1_008_241G1_scaffold_322_22
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18436..18600)
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQE9_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFG24997.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
type III restriction protein res subunit
L1_008_241G1_scaffold_322_23
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18915..19844
DNA (930bp) protein (310aa)
Putative HMW3 n=2 Tax=Veillonella RepID=D6KJY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI97890.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L1_008_241G1_scaffold_322_24
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19912..21465)
DNA (1554bp) protein (518aa)
Dipeptide-binding protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQE7_9FIRM
Dipeptide-binding protein {ECO:0000313|EMBL:EFG24995.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
family 5 extracellular solute-binding protein
L1_008_241G1_scaffold_322_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21852..22667)
DNA (816bp) protein (272aa)
Oligopeptide ABC transporter, ATP-binding protein OppF n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KZG8_9FIRM
Oligopeptide ABC transporter, ATP-binding protein OppF {ECO:0000313|EMBL:EGL77668.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
ABC transporter
L1_008_241G1_scaffold_322_26
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22660..23457)
DNA (798bp) protein (266aa)
ABC transporter, ATP-binding protein n=2 Tax=Veillonella parvula RepID=D1YQ10_9FIRM
Oligopeptide ABC transporter, ATP-binding protein OppD {ECO:0000313|EMBL:EGL77645.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
ABC transporter
L1_008_241G1_scaffold_322_27
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23470..24981)
DNA (1512bp) protein (504aa)
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA n=4 Tax=Veillonella RepID=T0UD28_9FIRM
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EGL77667.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
family 5 extracellular solute-binding protein
L1_008_241G1_scaffold_322_28
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25135..25956)
DNA (822bp) protein (274aa)
ABC transporter, permease protein n=3 Tax=Veillonella RepID=D1YQ08_9FIRM
Dipeptide ABC transporter, permease protein {ECO:0000313|EMBL:EFG23186.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
binding-protein-dependent transport system inner membrane protein
L1_008_241G1_scaffold_322_29
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25956..26894)
DNA (939bp) protein (313aa)
Dipeptide transport system permease protein DppB n=4 Tax=Veillonella RepID=T0SUU7_9FIRM
Oligopeptide ABC transporter, permease protein {ECO:0000313|EMBL:EFG23185.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
binding-protein-dependent transport system inner membrane protein
L1_008_241G1_scaffold_322_30
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27630..28700)
DNA (1071bp) protein (357aa)
Amino acid permease-associated region n=6 Tax=Veillonella RepID=D1BPD5_VEIPT
amino acid permease
Putrescine:ornithine antiporter {ECO:0000313|EMBL:EFG23184.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Displaying 30 items

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