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L1_008_241G1_scaffold_328

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_328_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23..946
DNA (924bp) protein (308aa)
Transcriptional regulator n=3 Tax=Bacteroides RepID=E5URJ9_9BACE
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS47782.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
transcriptional regulator
L1_008_241G1_scaffold_328_2
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1021..1848)
DNA (828bp) protein (276aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L5J7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EET15080.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_008_241G1_scaffold_328_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2055..4382)
DNA (2328bp) protein (776aa)
Glycosyltransferase family 51, candidate bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase n=6 Tax=Bacteroides RepID=A6L5J8_BACV8
glycosyl transferase family protein
Penicillin-binding protein 1A {ECO:0000313|EMBL:EOS01736.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_241G1_scaffold_328_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4543..5484
DNA (942bp) protein (314aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Aspartate carbamoyltransferase n=6 Tax=Bacteroides RepID=PYRB_BACV8
L1_008_241G1_scaffold_328_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5493..5960
DNA (468bp) protein (156aa)
aspartate carbamoyltransferase regulatory subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain n=7 Tax=Bacteroides RepID=PYRI_BACV8
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_241G1_scaffold_328_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5966..6553
DNA (588bp) protein (196aa)
Flavoredoxin n=6 Tax=Bacteroides RepID=A6L5K1_BACV8
flavoredoxin
Flavin reductase like domain protein {ECO:0000313|EMBL:KDS31279.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_241G1_scaffold_328_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6563..7282
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I8ZH45_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY74820.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_008_241G1_scaffold_328_8
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7529..8809
DNA (1281bp) protein (427aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Serine hydroxymethyltransferase n=7 Tax=Bacteroides RepID=GLYA_BACV8
L1_008_241G1_scaffold_328_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9008..10351
DNA (1344bp) protein (448aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L5K4_BACV8
hypothetical protein
MATE efflux family protein {ECO:0000313|EMBL:EIY74822.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_241G1_scaffold_328_10
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10400..11119
DNA (720bp) protein (240aa)
Outer membrane protein, OmpA family n=12 Tax=Bacteroides RepID=A6L5K5_BACV8
membrane protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEB24814.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L1_008_241G1_scaffold_328_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11248..11970
DNA (723bp) protein (241aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=6 Tax=Bacteroides RepID=A6L5K6_BACV8
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
L1_008_241G1_scaffold_328_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11942..12826)
DNA (885bp) protein (295aa)
Xylanase n=6 Tax=Bacteroides RepID=E5URK9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS47771.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
xylanase
L1_008_241G1_scaffold_328_13
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12952..14727)
DNA (1776bp) protein (592aa)
Pyruvate carboxylase subunit B n=5 Tax=Bacteroides RepID=A6L5K8_BACV8
pyruvate carboxylase subunit B
HMGL-like protein {ECO:0000313|EMBL:CDF17878.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_241G1_scaffold_328_14

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comp(14916..15419)
DNA (504bp) protein (168aa)
Sigma-70 region 2 n=14 Tax=root RepID=C3Q293_9BACE
RNA polymerase sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EKC50010.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_008_241G1_scaffold_328_15
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15578..16192)
DNA (615bp) protein (205aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=A6L5L2_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EEO61691.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L1_008_241G1_scaffold_328_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16276..17364
DNA (1089bp) protein (363aa)
UDP-N-acetylglucosamine 2-epimerase n=2 Tax=Bacteroides vulgatus RepID=I9IMY7_BACVU
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EOS01723.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
UDP-N-acetylglucosamine 2-epimerase
L1_008_241G1_scaffold_328_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17465..18841)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8ZH55_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY74830.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_008_241G1_scaffold_328_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19069..20667
DNA (1599bp) protein (533aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
CTP synthase n=7 Tax=Bacteroides RepID=A6L5L5_BACV8
L1_008_241G1_scaffold_328_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20707..22572
DNA (1866bp) protein (622aa)
Membrane protein insertase YidC n=7 Tax=root RepID=YIDC_BACV8
inner membrane protein translocase component YidC
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_008_241G1_scaffold_328_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22502..22735)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HCV9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS01719.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_241G1_scaffold_328_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22800..24827
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HCF2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS01718.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
prolyl oligopeptidase
Displaying 21 items

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