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L1_008_241G1_scaffold_334

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_334_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..448)
DNA (447bp) protein (149aa)
Permeases of the major facilitator superfamily n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DA42_BIFLN
Permeases of the major facilitator superfamily
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:CBK71045.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_008_241G1_scaffold_334_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(670..1686)
DNA (1017bp) protein (339aa)
Carbohydrate kinase n=2 Tax=Bifidobacterium longum RepID=B7GU20_BIFLS
sugar kinase
Sugar kinase {ECO:0000313|EMBL:KEY23476.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_241G1_scaffold_334_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2322..5165
DNA (2844bp) protein (948aa)
Putative DNA/RNA helicase n=1 Tax=Bifidobacterium longum E18 RepID=V6XWM9_BIFLN
Putative DNA/RNA helicase {ECO:0000313|EMBL:ESV32896.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
recG; ATP-dependent DNA helicase
L1_008_241G1_scaffold_334_4
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5392..6003
DNA (612bp) protein (204aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=Q8G7D9_BIFLO
n6-adenine-specific methylase
Uncharacterized protein {ECO:0000313|EMBL:CCY95336.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_008_241G1_scaffold_334_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6027..6842)
DNA (816bp) protein (272aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
tRNA (guanine-N(1)-)-methyltransferase n=14 Tax=Bifidobacterium RepID=TRMD_BIFLO
trmD; trmd
L1_008_241G1_scaffold_334_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6916..8562
DNA (1647bp) protein (549aa)
Possible protease or peptidase n=10 Tax=Bifidobacterium RepID=Q8G7E0_BIFLO
protease or peptidase
Collagenase {ECO:0000313|EMBL:KEY23471.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_241G1_scaffold_334_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8643..9623
DNA (981bp) protein (327aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DTR0_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI81739.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_008_241G1_scaffold_334_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9703..10578
DNA (876bp) protein (292aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=3 Tax=Bifidobacterium RepID=ISPD_BIFLO
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L1_008_241G1_scaffold_334_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10588..11265
DNA (678bp) protein (226aa)
Pyroglutamyl-peptidase I . Cysteine peptidase. MEROPS family C15 n=10 Tax=Bifidobacterium RepID=D6DA35_BIFLN
pyrrolidone-carboxylate peptidase
Pyrrolidone-carboxylate peptidase {ECO:0000313|EMBL:AAN24163.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_008_241G1_scaffold_334_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11413..12999
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E8E4_BIFLI
Cell division protein {ECO:0000313|EMBL:KHD95164.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L1_008_241G1_scaffold_334_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13114..14457
DNA (1344bp) protein (448aa)
Aminopeptidase {ECO:0000313|EMBL:ESV32904.1}; EC=3.4.22.40 {ECO:0000313|EMBL:ESV32904.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Aminopeptidase C n=9 Tax=Bifidobacterium longum RepID=D6DA33_BIFLN
aminopeptidase
L1_008_241G1_scaffold_334_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14749..15882
DNA (1134bp) protein (378aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361, ECO:0000313|EMBL:CBK71035.1};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=16 Tax=Bifidobacterium RepID=B3DTQ5_BIFLD
phospho-2-dehydro-3-deoxyheptonate aldolase
L1_008_241G1_scaffold_334_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16011..17243
DNA (1233bp) protein (411aa)
3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase n=14 Tax=Bifidobacterium RepID=B3DTQ4_BIFLD
phospho-2-dehydro-3-deoxyheptonate aldolase
3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase {ECO:0000313|EMBL:ACD98523.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_241G1_scaffold_334_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17365..18078
DNA (714bp) protein (238aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Methylthioadenosine nucleosidase n=14 Tax=Bifidobacterium RepID=D6DA30_BIFLN
nucleosidase
L1_008_241G1_scaffold_334_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18329..19660
DNA (1332bp) protein (444aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
His Kinase A (Phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=14 Tax=Bacteria RepID=D6DA28_BIFLN
two-component sensor kinase
L1_008_241G1_scaffold_334_16
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19793..20563
DNA (771bp) protein (257aa)
Response regulator of two-component system n=2 Tax=Bifidobacterium longum RepID=Q8G7F0_BIFLO
Response regulator receiver domain-containing protein {ECO:0000313|EMBL:EFV37947.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
response regulator of two-component system
L1_008_241G1_scaffold_334_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20813..21946
DNA (1134bp) protein (378aa)
Phosphate-binding protein PstS n=13 Tax=Bacteria RepID=D6DA26_BIFLN
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_008_241G1_scaffold_334_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22157..23110
DNA (954bp) protein (318aa)
ABC-type phosphate transport system permease component n=13 Tax=Bifidobacterium RepID=B3DTP8_BIFLD
phosphate ABC transporter permease
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EIJ22271.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_241G1_scaffold_334_19
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23110..24108
DNA (999bp) protein (333aa)
Phosphate ABC transporter permease component n=9 Tax=Bifidobacterium RepID=E8MGR6_BIFL2
phosphate ABC transporter permease
Phosphate ABC transporter {ECO:0000313|EMBL:CCY95351.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_008_241G1_scaffold_334_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24161..24940
DNA (780bp) protein (260aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Phosphate ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B1U8_BIFLN
pstB; pstb
Displaying 20 items

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