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L1_008_241G1_scaffold_401

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_401_1
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(198..1436)
DNA (1239bp) protein (413aa)
UPI0003D5B7D9 related cluster n=1 Tax=unknown RepID=UPI0003D5B7D9
Aluminum resistance family protein {ECO:0000313|EMBL:ETJ12915.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
aluminum resistance protein
L1_008_241G1_scaffold_401_2
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1433..2362)
DNA (930bp) protein (310aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D61210 related cluster n=1 Tax=unknown RepID=UPI0003D61210
tRNA delta(2)-isopentenylpyrophosphate transferase
L1_008_241G1_scaffold_401_3
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2359..3171)
DNA (813bp) protein (271aa)
UPI0003D60315 related cluster n=1 Tax=unknown RepID=UPI0003D60315
Uncharacterized protein {ECO:0000313|EMBL:ETJ12913.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
hypothetical protein
L1_008_241G1_scaffold_401_4
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3173..5236)
DNA (2064bp) protein (688aa)
UPI0003D643C4 related cluster n=1 Tax=unknown RepID=UPI0003D643C4
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
DNA mismatch repair protein MutL
L1_008_241G1_scaffold_401_5
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5236..7869)
DNA (2634bp) protein (878aa)
UPI0003D6939C related cluster n=2 Tax=unknown RepID=UPI0003D6939C
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
DNA mismatch repair protein MutS
L1_008_241G1_scaffold_401_6
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7872..9188)
DNA (1317bp) protein (439aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D634E5 related cluster n=1 Tax=unknown RepID=UPI0003D634E5
MiaB family RNA modification protein
L1_008_241G1_scaffold_401_7
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9197..10072)
DNA (876bp) protein (292aa)
UPI0003D698A2 related cluster n=1 Tax=unknown RepID=UPI0003D698A2
Uncharacterized protein {ECO:0000313|EMBL:ETJ12909.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
hypothetical protein
L1_008_241G1_scaffold_401_8
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10088..10915)
DNA (828bp) protein (276aa)
UPI0003D61CE1 related cluster n=1 Tax=unknown RepID=UPI0003D61CE1
Uncharacterized protein {ECO:0000313|EMBL:ETJ12908.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
PHP domain-containing protein
L1_008_241G1_scaffold_401_9
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(11033..12751)
DNA (1719bp) protein (573aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Proline--tRNA ligase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FR05_9FIRM
prolyl-tRNA synthetase
L1_008_241G1_scaffold_401_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12745..13830)
DNA (1086bp) protein (362aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FR06_9FIRM
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L1_008_241G1_scaffold_401_11
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13849..14910)
DNA (1062bp) protein (354aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D61177 related cluster n=1 Tax=unknown RepID=UPI0003D61177
membrane-associated zinc metalloprotease
L1_008_241G1_scaffold_401_12
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14874..16019)
DNA (1146bp) protein (382aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D64EFB related cluster n=1 Tax=unknown RepID=UPI0003D64EFB
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L1_008_241G1_scaffold_401_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16038..16862)
DNA (825bp) protein (275aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
UPI0003D66941 related cluster n=1 Tax=unknown RepID=UPI0003D66941
phosphatidate cytidylyltransferase
L1_008_241G1_scaffold_401_14
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16866..17630)
DNA (765bp) protein (255aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D5BCF7 related cluster n=1 Tax=unknown RepID=UPI0003D5BCF7
UDP diphosphate synthase
L1_008_241G1_scaffold_401_15
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17611..17862)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FR11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEP65354.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
hypothetical protein
L1_008_241G1_scaffold_401_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17862..18422)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FR12_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
ribosome recycling factor
L1_008_241G1_scaffold_401_17
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18428..19153)
DNA (726bp) protein (242aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D635BC related cluster n=1 Tax=unknown RepID=UPI0003D635BC
uridylate kinase
L1_008_241G1_scaffold_401_18
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19216..19899)
DNA (684bp) protein (228aa)
Elongation factor Ts n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCU2_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
translation elongation factor Ts
Displaying 18 items

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