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L1_008_241G1_scaffold_416

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_416_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(126..578)
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
D-tyrosyl-tRNA deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=3 Tax=Erysipelotrichaceae RepID=B0N101_9FIRM
L1_008_241G1_scaffold_416_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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655..1920
DNA (1266bp) protein (422aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=H1APW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45098.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
recombination factor protein RarA
L1_008_241G1_scaffold_416_3
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2133..3440
DNA (1308bp) protein (436aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Phosphomethylpyrimidine synthase n=2 Tax=Coprobacillus RepID=H1APW7_9FIRM
thiamine biosynthesis protein ThiC
L1_008_241G1_scaffold_416_4
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3467..4195)
DNA (729bp) protein (243aa)
DNA-binding helix-turn-helix protein n=3 Tax=Erysipelotrichaceae RepID=B0N104_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45100.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L1_008_241G1_scaffold_416_5
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4307..5218)
DNA (912bp) protein (304aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
tRNA dimethylallyltransferase n=3 Tax=Erysipelotrichaceae RepID=B0N105_9FIRM
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
L1_008_241G1_scaffold_416_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5218..7059)
DNA (1842bp) protein (614aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N106_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
DNA mismatch repair protein MutL
L1_008_241G1_scaffold_416_7
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7060..9570)
DNA (2511bp) protein (837aa)
DNA mismatch repair protein MutS n=3 Tax=Coprobacillus RepID=C3RNB1_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
mutS; DNA mismatch repair protein MutS
L1_008_241G1_scaffold_416_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9646..10140)
DNA (495bp) protein (165aa)
Spore coat protein E n=5 Tax=Erysipelotrichaceae RepID=B0N108_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32226.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
cotE; Outer spore coat protein
L1_008_241G1_scaffold_416_9
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10210..11724)
DNA (1515bp) protein (505aa)
Inosine 5-monophosphate dehydrogenase {ECO:0000313|EMBL:EDS19925.1}; EC=1.1.1.205 {ECO:0000313|EMBL:EDS19925.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Inosine 5-monophosphate dehydrogenase n=2 Tax=Erysipelotrichaceae RepID=B0N109_9FIRM
inosine 5-monophosphate dehydrogenase
L1_008_241G1_scaffold_416_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11800..12138)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N110_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19926.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_008_241G1_scaffold_416_11
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12119..13564)
DNA (1446bp) protein (482aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
tRNA-i(6)A37 thiotransferase enzyme MiaB (EC:1.3.1.74)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=4 Tax=Erysipelotrichaceae RepID=B0N111_9FIRM
L1_008_241G1_scaffold_416_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13691..13936)
DNA (246bp) protein (82aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N112_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32222.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_008_241G1_scaffold_416_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14049..14309)
DNA (261bp) protein (87aa)
Stage V sporulation protein S (SpoVS) n=5 Tax=Erysipelotrichaceae RepID=B0N113_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92699.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
stage V sporulation protein S
L1_008_241G1_scaffold_416_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14355..15128)
DNA (774bp) protein (258aa)
Metallophosphoesterase n=5 Tax=Erysipelotrichaceae RepID=C3RNA4_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:EHQ45110.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ymdB; putative metallophosphatase
L1_008_241G1_scaffold_416_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15170..16726)
DNA (1557bp) protein (519aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Ribonuclease Y n=5 Tax=Erysipelotrichaceae RepID=B0N115_9FIRM
2',3'-cyclic-nucleotide 2'-phosphodiesterase
L1_008_241G1_scaffold_416_16
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16993..19311
DNA (2319bp) protein (773aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
DNA topoisomerase n=2 Tax=Erysipelotrichaceae RepID=B0N116_9FIRM
DNA topoisomerase III
Displaying 16 items

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