ggKbase home page

L1_008_241G1_scaffold_436

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_436_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

122..937
DNA (816bp) protein (272aa)
Response regulator receiver domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C9Y6_BIFBA
Two-component response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:AEF26575.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_436_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1226..2353)
DNA (1128bp) protein (376aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C9Y7_BIFBA
Permease protein of ABC transporter system
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:AEF28116.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_436_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2350..3891)
DNA (1542bp) protein (514aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C9Y7_BIFBA
Permease protein of ABC transporter system
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:AEF28116.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_436_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3923..4426)
DNA (504bp) protein (168aa)
ATP-binding protein of ABC transporter system n=2 Tax=Bifidobacterium breve RepID=F9XYW9_BIFBU
ATP-binding protein of ABC transporter system
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:AHJ20990.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_436_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4414..4650)
DNA (237bp) protein (79aa)
ATP-binding protein of ABC transporter system n=2 Tax=Bifidobacterium breve RepID=F9XYW9_BIFBU
ATP-binding protein of ABC transporter system
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ABE95493.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_241G1_scaffold_436_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5108..6424)
DNA (1317bp) protein (439aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=4 Tax=Bifidobacterium breve RepID=F6C9Y9_BIFBA
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:AHJ19079.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_241G1_scaffold_436_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6915..7787
DNA (873bp) protein (291aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=S2ZK18_BIFBR
L1_008_241G1_scaffold_436_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8320..8478
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BNY2_BIFBR
Transposase
Uncharacterized protein {ECO:0000313|EMBL:EPD74694.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_436_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8802..9176
DNA (375bp) protein (125aa)
UPF0102 protein HMPREF9228_1045 n=4 Tax=Bifidobacterium breve RepID=F6C9Z2_BIFBA
Endonuclease
UPF0102 protein B2258_0776 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_436_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9191..10726
DNA (1536bp) protein (512aa)
Mg chelatase-like protein n=4 Tax=Bifidobacterium breve RepID=F6C9Z3_BIFBA
Mg chelatase-like protein
Mg chelatase-like protein {ECO:0000313|EMBL:EFE89366.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99810.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_241G1_scaffold_436_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10723..12342
DNA (1620bp) protein (540aa)
DNA protecting protein DprA n=3 Tax=Bifidobacterium breve RepID=S2ZE92_BIFBR
Smf protein
DNA protecting protein DprA {ECO:0000313|EMBL:EPD74691.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_436_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12405..14306
DNA (1902bp) protein (634aa)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=4 Tax=Bifidobacterium breve RepID=D4BNX7_BIFBR
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:ERI86302.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
succinate dehydrogenase or fumarate reductase, flavoprotein subunit
L1_008_241G1_scaffold_436_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14379..15329
DNA (951bp) protein (317aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=3 Tax=Bifidobacterium breve RepID=F6C9Z6_BIFBA
Succinate dehydrogenase iron-sulfur protein
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:EFE89363.1}; Succinate dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:BAQ99807.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_241G1_scaffold_436_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15392..16057
DNA (666bp) protein (222aa)
safC; Caffeoyl-CoA O-methyltransferase (EC:2.1.1.104)
Caffeoyl-CoA O-methyltransferase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYN4_BIFBU
Caffeoyl-CoA O-methyltransferase {ECO:0000313|EMBL:AHJ20981.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_436_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16098..17000)
DNA (903bp) protein (301aa)
Lysine decarboxylase family n=4 Tax=Bifidobacterium breve RepID=F9XYN3_BIFBU
Lysine decarboxylase family
TIGR00730 family protein {ECO:0000313|EMBL:EFE89361.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99805.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_241G1_scaffold_436_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17039..18427)
DNA (1389bp) protein (463aa)
Na(+)/H(+) antiporter NhaA n=2 Tax=Bifidobacterium breve RepID=D4BNX3_BIFBR
Na/H antiporter nhaA
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_241G1_scaffold_436_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18508..19713)
DNA (1206bp) protein (402aa)
Putative hemolysin n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DXD4_BIFBR
Cystathionine beta-lyase
Putative hemolysin {ECO:0000313|EMBL:ERI86307.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_241G1_scaffold_436_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20106..21467)
DNA (1362bp) protein (454aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=5 Tax=Bifidobacterium breve RepID=F9XYN0_BIFBU
clpX; ATP-dependent Clp protease ATP-binding subunit clpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_241G1_scaffold_436_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21641..22324)
DNA (684bp) protein (228aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1685 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve.;"
ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bifidobacterium breve RepID=F9XYM9_BIFBU
ATP-dependent Clp protease proteolytic subunit
L1_008_241G1_scaffold_436_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22330..22932)
DNA (603bp) protein (201aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
ATP-dependent Clp protease proteolytic subunit n=7 Tax=Bifidobacterium breve RepID=F9XYM8_BIFBU
ATP-dependent Clp protease proteolytic subunit
L1_008_241G1_scaffold_436_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23011..23388)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6CA04_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20974.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_436_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23533..24918)
DNA (1386bp) protein (462aa)
Chloride transporter, ClC family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNW7_BIFBR
Chloride channel protein
Chloride transporter, ClC family {ECO:0000313|EMBL:EFE89354.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99798.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_241G1_scaffold_436_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25102..26475)
DNA (1374bp) protein (458aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Trigger factor n=3 Tax=Bifidobacterium breve RepID=F9XYM5_BIFBU
Trigger factor, ppiase
L1_008_241G1_scaffold_436_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26477..27712)
DNA (1236bp) protein (412aa)
3'-5' exonuclease n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C759_BIFBR
Ribonuclease D
3'-5' exonuclease {ECO:0000313|EMBL:ERI86314.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_241G1_scaffold_436_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27709..28341)
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=H3L2Z6_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ99795.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_241G1_scaffold_436_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28524..29405)
DNA (882bp) protein (294aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Pyruvate formate-lyase 1-activating enzyme n=6 Tax=Bifidobacterium breve RepID=F6CA09_BIFBA
Pyruvate formate-lyase activating enzyme
L1_008_241G1_scaffold_436_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29518..29850)
DNA (333bp) protein (111aa)
pfl; Formate acetyltransferase (EC:2.3.1.54)
Formate C-acetyltransferase n=2 Tax=Bifidobacterium breve RepID=F6CA10_BIFBA
Formate acetyltransferase {ECO:0000313|EMBL:KEY32759.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_241G1_scaffold_436_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29796..31703)
DNA (1908bp) protein (636aa)
Formate acetyltransferase n=4 Tax=Bifidobacterium breve RepID=F9XYM1_BIFBU
Formate C-acetyltransferase {ECO:0000313|EMBL:ERI86317.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Formate acetyltransferase
L1_008_241G1_scaffold_436_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31978..32208)
DNA (231bp) protein (77aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6CA11_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI86318.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_241G1_scaffold_436_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32227..33924)
DNA (1698bp) protein (566aa)
NAD+ synthase {ECO:0000313|EMBL:EFE89346.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EFE89346.1};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Glutamine-dependent NAD(+) synthetase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L300_BIFBR
Glutamine-dependent NAD( ) synthetase
Displaying items 1-30 of 39 in total

View Taxonomy