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L1_008_241G1_scaffold_443

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_443_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(100..825)
DNA (726bp) protein (242aa)
Thiamine pyrophosphokinase n=11 Tax=Bifidobacterium RepID=B3DQT0_BIFLD
thiamine pyrophosphokinase
Thiamine pyrophosphokinase {ECO:0000313|EMBL:KEY31458.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_241G1_scaffold_443_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1057..2061
DNA (1005bp) protein (335aa)
Spermidine synthase n=11 Tax=Bifidobacterium RepID=B3DQT1_BIFLD
speE; spee
Spermidine synthase {ECO:0000313|EMBL:ACD97677.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_241G1_scaffold_443_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2433..3068
DNA (636bp) protein (212aa)
Translation initiation factor 3 n=13 Tax=Bifidobacterium RepID=B3DQT2_BIFLD
infC; infc
Translation initiation factor IF-3 {ECO:0000313|EMBL:KEY31456.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_241G1_scaffold_443_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3049..3243
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=20 Tax=Bifidobacterium RepID=RL35_BIFLD
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_008_241G1_scaffold_443_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3296..3679
DNA (384bp) protein (128aa)
50S ribosomal protein L20 n=14 Tax=Bifidobacterium RepID=RL20_BIFLD
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_241G1_scaffold_443_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3794..4720
DNA (927bp) protein (309aa)
Tyrosine recombinase XerD n=14 Tax=Bifidobacterium RepID=D6DCV1_BIFLN
integrase/recombinase
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_241G1_scaffold_443_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4848..7694
DNA (2847bp) protein (949aa)
ABC-type antimicrobial peptide transport system, ATPase component n=11 Tax=Bifidobacterium RepID=D6DCV2_BIFLN
ABC transporter {ECO:0000313|EMBL:KEY25581.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
salx-type abc antimicrobial peptide transport system atpase component
L1_008_241G1_scaffold_443_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7896..8795
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4K9_BIFLO
hypothetical protein
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EEI79760.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_008_241G1_scaffold_443_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8814..9728
DNA (915bp) protein (305aa)
Condensin subunit ScpA n=12 Tax=Bifidobacterium RepID=D6DCV4_BIFLN
hypothetical protein
Condensin subunit ScpA {ECO:0000313|EMBL:CBK70325.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_008_241G1_scaffold_443_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9780..10457
DNA (678bp) protein (226aa)
Segregation and condensation protein ScpB n=15 Tax=Bifidobacterium RepID=V6XX05_BIFLN
hypothetical protein
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_241G1_scaffold_443_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10589..11416
DNA (828bp) protein (276aa)
Hydrolase, NUDIX family n=6 Tax=Bifidobacterium longum RepID=C5EC01_BIFLI
hypothetical protein
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KEY31448.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_241G1_scaffold_443_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11476..12756
DNA (1281bp) protein (427aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Quinolinate synthase A n=15 Tax=Bifidobacterium RepID=E4R2A4_BIFLM
quinolinate synthase
L1_008_241G1_scaffold_443_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12848..14479
DNA (1632bp) protein (544aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L-aspartate oxidase n=8 Tax=Bifidobacterium longum RepID=E8MDW8_BIFL2
L-aspartate oxidase
L1_008_241G1_scaffold_443_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14483..15376
DNA (894bp) protein (298aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=11 Tax=Bifidobacterium RepID=B3DQU3_BIFLD
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:KEY25574.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_241G1_scaffold_443_15
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15379..16626
DNA (1248bp) protein (416aa)
Cysteine sulfinate desulfinase/cysteine desulfurase n=13 Tax=Bifidobacterium RepID=B3DQU4_BIFLD
pyridoxal-phosphate-dependent aminotransferase
Putative pyridoxal-phosphate-dependent aminotransferase {ECO:0000313|EMBL:CCY95676.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_008_241G1_scaffold_443_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16658..18007
DNA (1350bp) protein (450aa)
Sugar transport protein n=15 Tax=Bifidobacterium RepID=F8APL3_BIFLN
permease
Transporter, major facilitator family protein {ECO:0000313|EMBL:EIJ26957.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_241G1_scaffold_443_17
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18322..18396
DNA (75bp) protein (25aa)
GTP-binding protein TypA {ECO:0000313|EMBL:AFU71185.1}; EC=2.7.1.25 {ECO:0000313|EMBL:AFU71185.1};; EC=2.7.7.4 {ECO:0000313|EMBL:AFU71185.1};; TaxID=1147128 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides (strain PRL2011).;"
GTP-binding protein TypA n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3BHC0_BIFLN
typA; GTP-binding protein
Displaying 17 items

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