ggKbase home page

L1_008_241G1_scaffold_454

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_454_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..418)
DNA (417bp) protein (139aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Acetate kinase n=6 Tax=Bifidobacterium breve RepID=F6CA26_BIFBA
Acetate kinase
L1_008_241G1_scaffold_454_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(550..2220)
DNA (1671bp) protein (557aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:ABE95457.1}; EC=2.3.1.8 {ECO:0000313|EMBL:ABE95457.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Phosphate acetyltransferase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYK6_BIFBU
Phosphate acetyltransferase
L1_008_241G1_scaffold_454_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2641..3663)
DNA (1023bp) protein (341aa)
prsA; Ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Ribose-phosphate pyrophosphokinase n=2 Tax=Bifidobacterium breve RepID=F9XYK7_BIFBU
L1_008_241G1_scaffold_454_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3804..5735)
DNA (1932bp) protein (644aa)
Acyltransferase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNS6_BIFBR
Acyltransferase family protein {ECO:0000313|EMBL:AHJ20955.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Acyltransferase family protein
L1_008_241G1_scaffold_454_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6426..7097
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=H3L056_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74655.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L1_008_241G1_scaffold_454_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7350..8816
DNA (1467bp) protein (489aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GX28_BIFLN
Transposase
Uncharacterized protein {ECO:0000313|EMBL:EEI80258.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_008_241G1_scaffold_454_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8813..9574
DNA (762bp) protein (254aa)
IstB-like ATP-binding protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMR1_BIFBR
Transposase
IstB-like ATP-binding protein {ECO:0000313|EMBL:EFE89760.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_241G1_scaffold_454_8
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10323..10541
DNA (219bp) protein (73aa)
DNA binding domain, excisionase family n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EB73_9ACTN
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:CBL04970.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_241G1_scaffold_454_9
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

10538..10636
DNA (99bp) protein (33aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH94652.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L1_008_241G1_scaffold_454_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10620..10829
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZE24_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74656.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical protein
L1_008_241G1_scaffold_454_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10971..11645
DNA (675bp) protein (225aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53001.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_241G1_scaffold_454_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12304..13416)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AEL0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74659.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
ATPase AAA
L1_008_241G1_scaffold_454_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13406..14194)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJW7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74660.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_454_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14268..15323)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZE31_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74661.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L1_008_241G1_scaffold_454_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15378..15872
DNA (495bp) protein (165aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CLN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO25579.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Site-specific recombinase XerD
L1_008_241G1_scaffold_454_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15988..17550)
DNA (1563bp) protein (521aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
GMP synthase n=1 Tax=Bifidobacterium breve RepID=UPI0002E31688
GMP synthase [glutamine-hydrolyzing]
Displaying 16 items

View Taxonomy