ggKbase home page

L1_008_241G1_scaffold_459

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_459_1
unknown

Not on your lists

2..139
DNA (138bp) protein (46aa)

This feature has no annotations

L1_008_241G1_scaffold_459_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(291..1646)
DNA (1356bp) protein (452aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
site-2 protease. Metallo peptidase. MEROPS family M50B (EC:3.4.24.-)
RIP metalloprotease RseP n=2 Tax=Bacteroides caccae RepID=I9PJE7_9BACE
L1_008_241G1_scaffold_459_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1677..2870)
DNA (1194bp) protein (398aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UTQ3_9BACE
L1_008_241G1_scaffold_459_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2870..3730)
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PIZ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71820.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Membrane proteins related to metalloendopeptidases
L1_008_241G1_scaffold_459_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3790..4329)
DNA (540bp) protein (180aa)
Ribosome maturation factor RimM n=2 Tax=Bacteroides RepID=A5ZLK2_9BACE
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
16S rRNA processing protein RimM
L1_008_241G1_scaffold_459_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4326..5630)
DNA (1305bp) protein (435aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=3 Tax=Bacteroides RepID=A5ZLK3_9BACE
L1_008_241G1_scaffold_459_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5670..6350)
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZLK4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19094.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_241G1_scaffold_459_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6363..7052)
DNA (690bp) protein (230aa)
Universal bacterial protein YeaZ n=3 Tax=Bacteroides RepID=A5ZLK5_9BACE
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EDM19095.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L1_008_241G1_scaffold_459_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7459..10719)
DNA (3261bp) protein (1087aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UQ76_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16355.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_241G1_scaffold_459_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10757..12133)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9E945_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16354.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_241G1_scaffold_459_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12172..13089)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PJD7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16353.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative lipoprotein
L1_008_241G1_scaffold_459_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13282..14706)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZLL0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19100.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative lipoprotein
L1_008_241G1_scaffold_459_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14775..16259)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZLL1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19101.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_241G1_scaffold_459_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16308..16904)
DNA (597bp) protein (199aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZLL2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71810.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_241G1_scaffold_459_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17134..17808)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZLL3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71809.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
Displaying 15 items

View Taxonomy