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L1_008_241G1_scaffold_508

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_508_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..94
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHU2_BIFBR
Conserved hypothetical protein, ATPase
AAA domain protein {ECO:0000313|EMBL:EIJ24299.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_241G1_scaffold_508_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(353..718)
DNA (366bp) protein (122aa)
Gluconate kinase n=16 Tax=Bifidobacterium RepID=B3DP00_BIFLD
carbohydrate kinase
Gluconate kinase {ECO:0000313|EMBL:ACD98859.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_241G1_scaffold_508_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(805..1620)
DNA (816bp) protein (272aa)
Predicted metal-dependent hydrolase n=2 Tax=Bifidobacterium RepID=D6DAY2_BIFLN
Predicted metal-dependent hydrolase
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:CBK71335.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_008_241G1_scaffold_508_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1748..3073)
DNA (1326bp) protein (442aa)
4-aminobutyrate aminotransferase n=3 Tax=Bifidobacterium longum RepID=B3DP03_BIFLD
gabT; 4-aminobutyrate aminotransferase
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:ACD98862.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_241G1_scaffold_508_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3482..5080
DNA (1599bp) protein (533aa)
Transcriptional regulator n=3 Tax=Bifidobacterium RepID=F8APB5_BIFLN
Transcriptional regulator {ECO:0000313|EMBL:BAP82689.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
transcriptional regulator
L1_008_241G1_scaffold_508_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5472..5807
DNA (336bp) protein (112aa)
Transposase n=7 Tax=Bifidobacterium longum subsp. longum RepID=E4R1L9_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71338.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_008_241G1_scaffold_508_7
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6743..7654)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E968_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EFV37572.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L1_008_241G1_scaffold_508_8
unknown

Not on your lists

7666..7914
DNA (249bp) protein (83aa)

This feature has no annotations

L1_008_241G1_scaffold_508_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7898..8500
DNA (603bp) protein (201aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44425.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_008_241G1_scaffold_508_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8451..9785)
DNA (1335bp) protein (445aa)
Aspartate/tyrosine/aromatic aminotransferase n=13 Tax=Bifidobacterium RepID=B3DP11_BIFLD
aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:AIW43103.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_008_241G1_scaffold_508_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9991..10425
DNA (435bp) protein (145aa)
Transcriptional regulator n=19 Tax=Bifidobacterium RepID=B3DP12_BIFLD
transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:KEY24040.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_241G1_scaffold_508_12
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10744..12090
DNA (1347bp) protein (449aa)
Glutamate dehydrogenase n=18 Tax=Bifidobacterium RepID=B3DP13_BIFLD
glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_008_241G1_scaffold_508_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12560..13981)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=Q8G6K9_BIFLO
AAA+ superfamily ATPase
Uncharacterized protein {ECO:0000313|EMBL:AAN24453.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_008_241G1_scaffold_508_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14812..15378)
DNA (567bp) protein (189aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=B3DP16_BIFLD
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KEY24044.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_241G1_scaffold_508_15
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15448..16242)
DNA (795bp) protein (265aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
DNA gyrase subunit A n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MWJ2_9BIFI
gyrA suspected. See adjacent gene [L1_008_241G1_scaffold_508_16].
DNA gyrase subunit A
L1_008_241G1_scaffold_508_16
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(16214..17554)
DNA (1341bp) protein (447aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
DNA gyrase subunit A n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G6K6_BIFLO
DNA gyrase subunit A
L1_008_241G1_scaffold_508_17
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17596..17976
DNA (381bp) protein (127aa)
val start codon n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A40C2
hypothetical protein
Val start codon {ECO:0000313|EMBL:ABA48200.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1710b).;"
L1_008_241G1_scaffold_508_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17999..18745)
DNA (747bp) protein (249aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
DNA gyrase subunit B n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX58_BIFLJ
DNA gyrase subunit B
Displaying 18 items

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