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L1_008_241G1_scaffold_512

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_512_1
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..297)
DNA (297bp) protein (99aa)
50S ribosomal protein L11 n=2 Tax=Bacteroides RepID=C6IBK1_9BACE
rplK; putative 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L1_008_241G1_scaffold_512_2
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(359..901)
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=21 Tax=Bacteroides RepID=D6CXR1_9BACE
transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L1_008_241G1_scaffold_512_3
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(917..1108)
DNA (192bp) protein (64aa)
Protein translocase subunit SecE n=18 Tax=Bacteroides RepID=A5ZBF8_9BACE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
secE; Putative preprotein translocase SecE subunit
L1_008_241G1_scaffold_512_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1248..2432)
DNA (1185bp) protein (395aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=2 Tax=Bacteroides caccae RepID=A5ZBF7_9BACE
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_241G1_scaffold_512_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2991..3290)
DNA (300bp) protein (100aa)
Ribosomal subunit interface protein n=3 Tax=Bacteroides RepID=A5ZBF6_9BACE
Ribosomal subunit interface protein {ECO:0000313|EMBL:EDM21825.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
sigma-54 modulation protein
L1_008_241G1_scaffold_512_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3307..4188)
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=2 Tax=Bacteroides caccae RepID=A5ZBF5_9BACE
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
integrase, site-specific recombinase
L1_008_241G1_scaffold_512_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4262..4453)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=3 Tax=Bacteroides RepID=A5ZBF4_9BACE
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
30S ribosomal protein S21
L1_008_241G1_scaffold_512_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4643..6424
DNA (1782bp) protein (594aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Creatinase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBF3_9BACE
Creatinase {ECO:0000313|EMBL:EDM21822.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_241G1_scaffold_512_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6504..7019
DNA (516bp) protein (172aa)
Bacterial transferase hexapeptide repeat protein n=3 Tax=Bacteroides RepID=A5ZBF2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74279.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
L1_008_241G1_scaffold_512_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7236..7658
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V0Y8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18912.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
thiol:disulfide interchange protein
L1_008_241G1_scaffold_512_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7655..9289
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5USQ2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74156.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
thiol:disulfide interchange protein TlpA
L1_008_241G1_scaffold_512_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9427..10650)
DNA (1224bp) protein (408aa)
3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBE9_9BACE
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EDM21818.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_241G1_scaffold_512_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10668..12185)
DNA (1518bp) protein (506aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=2 Tax=Bacteroides RepID=A5ZBE8_9BACE
L1_008_241G1_scaffold_512_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12280..14352
DNA (2073bp) protein (691aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U7Q9_9BACE
7TM receptor with intracellular HD hydrolase {ECO:0000313|EMBL:EDM21816.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
uncharacterized domain HDIG
L1_008_241G1_scaffold_512_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14327..14797)
DNA (471bp) protein (157aa)
protein tyrosine phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=3 Tax=Bacteroides RepID=A5ZBE6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74152.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_241G1_scaffold_512_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14858..16309)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PRD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18918.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
Displaying 16 items

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