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L1_008_241G1_scaffold_523

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_523_1
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..154
DNA (153bp) protein (51aa)
50S ribosomal protein L27 n=2 Tax=Veillonella RepID=K9DPZ4_9FIRM
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L1_008_241G1_scaffold_523_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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261..965
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein n=2 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2S4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGL76440.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
ABC transporter ATP-binding protein
L1_008_241G1_scaffold_523_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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962..1726
DNA (765bp) protein (255aa)
TIGR00245 family protein n=2 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2S5_9FIRM
TIGR00245 family protein {ECO:0000313|EMBL:EGL76546.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
membrane protein
L1_008_241G1_scaffold_523_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2019..3041
DNA (1023bp) protein (341aa)
Iron(3+)-hydroxamate import system permease protein FhuB n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2S6_9FIRM
Iron(3+)-hydroxamate import system permease protein FhuB {ECO:0000313|EMBL:EGL76532.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
fecCD transport family protein
L1_008_241G1_scaffold_523_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3043..4041
DNA (999bp) protein (333aa)
Ferrichrome transport system permease protein FhuG n=2 Tax=Veillonella parvula RepID=T0UFF8_9FIRM
Putative ferrichrome transport system permease protein FhuG {ECO:0000313|EMBL:EGL76457.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
iron ABC transporter permease
L1_008_241G1_scaffold_523_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4056..4865
DNA (810bp) protein (270aa)
Ferrichrome ABC transporter, ATP-binding protein FhuC n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2S8_9FIRM
Ferrichrome ABC transporter, ATP-binding protein FhuC {ECO:0000313|EMBL:EGL76606.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
ABC transporter family protein
L1_008_241G1_scaffold_523_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4840..5955
DNA (1116bp) protein (372aa)
ABC transporter, substrate-binding protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2S9_9FIRM
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EGL76601.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
hypothetical protein
L1_008_241G1_scaffold_523_8
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6230..7684
DNA (1455bp) protein (485aa)
Putative ThiH protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KIK1_9FIRM
Putative ThiH protein {ECO:0000313|EMBL:EFG25727.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
biotin and thiamin synthesis associated protein
L1_008_241G1_scaffold_523_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7879..9861
DNA (1983bp) protein (661aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EGL76596.1}; EC=3.1.-.- {ECO:0000313|EMBL:EGL76596.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2T1_9FIRM
single-stranded-DNA-specific exonuclease RecJ
L1_008_241G1_scaffold_523_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9873..12113
DNA (2241bp) protein (747aa)
GTP diphosphokinase {ECO:0000313|EMBL:EGL76476.1}; EC=2.7.6.5 {ECO:0000313|EMBL:EGL76476.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
GTP diphosphokinase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2T2_9FIRM
(p)ppGpp synthetase I SpoT/RelA
L1_008_241G1_scaffold_523_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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12113..12748
DNA (636bp) protein (212aa)
Metallo-beta-lactamase domain protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2T3_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EGL76454.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
beta-lactamase
L1_008_241G1_scaffold_523_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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12790..13278
DNA (489bp) protein (163aa)
Transcriptional regulator, Fur family n=3 Tax=Veillonella RepID=D1YS32_9FIRM
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EFB85405.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Fur family ferric uptake regulator
L1_008_241G1_scaffold_523_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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13271..14698
DNA (1428bp) protein (476aa)
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:EGL76514.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EGL76514.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Coproporphyrinogen dehydrogenase HemZ n=3 Tax=Veillonella parvula RepID=D1YS31_9FIRM
radical SAM protein
L1_008_241G1_scaffold_523_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14698..15969
DNA (1272bp) protein (424aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Histidine--tRNA ligase n=2 Tax=Veillonella parvula RepID=D1YS30_9FIRM
histidyl-tRNA synthetase
L1_008_241G1_scaffold_523_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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15966..17708
DNA (1743bp) protein (581aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EGL76438.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EGL76438.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Aspartate--tRNA ligase n=2 Tax=Veillonella parvula RepID=T0T3U8_9FIRM
aspartyl-tRNA synthetase
L1_008_241G1_scaffold_523_16
unknown

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comp(17774..17989)
DNA (216bp) protein (72aa)

This feature has no annotations

L1_008_241G1_scaffold_523_17
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18205..19506
DNA (1302bp) protein (434aa)
ATPase, AAA family n=3 Tax=Veillonella RepID=T0SWX4_9FIRM
ATPase, AAA family {ECO:0000313|EMBL:EFG23940.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
ATPase AAA
L1_008_241G1_scaffold_523_18
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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19589..22333
DNA (2745bp) protein (915aa)
Stage III sporulation protein E n=2 Tax=Veillonella RepID=D6KNP1_9FIRM
Stage III sporulation protein E {ECO:0000313|EMBL:EGL76568.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
cell division protein FtsK
L1_008_241G1_scaffold_523_19
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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22382..24763
DNA (2382bp) protein (794aa)
UPF0313 protein HMPREF0873_00587 n=2 Tax=Veillonella RepID=D6KIJ0_9FIRM
UPF0313 protein HMPREF0873_00587 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
radical SAM protein
L1_008_241G1_scaffold_523_20
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24820..25857
DNA (1038bp) protein (346aa)
ABC transporter, solute-binding protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U2_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EGL76452.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
extracellular solute-binding protein
L1_008_241G1_scaffold_523_21
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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25899..27263
DNA (1365bp) protein (455aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U3_9FIRM
MiaB-like tRNA modifying enzyme YliG
L1_008_241G1_scaffold_523_22
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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27301..28548
DNA (1248bp) protein (416aa)
Putative competence-damage inducible protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U4_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
competence/damage-inducible protein CinA
L1_008_241G1_scaffold_523_23
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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28553..29524
DNA (972bp) protein (324aa)
Protein RecA n=3 Tax=Veillonella RepID=T0UFD6_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
recA protein
L1_008_241G1_scaffold_523_24
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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29527..29970
DNA (444bp) protein (148aa)
Regulatory protein RecX n=2 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U6_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
regulatory protein RecX
L1_008_241G1_scaffold_523_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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30089..31690
DNA (1602bp) protein (534aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ribonuclease Y n=4 Tax=Veillonella parvula RepID=T0T3U2_9FIRM
RNA binding metal dependent phosphohydrolase
L1_008_241G1_scaffold_523_26
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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31925..33718
DNA (1794bp) protein (598aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
DNA primase n=2 Tax=Veillonella RepID=D6KNN2_9FIRM
DNA primase
L1_008_241G1_scaffold_523_27
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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33726..34907
DNA (1182bp) protein (394aa)
RNA polymerase sigma factor SigA n=5 Tax=Veillonella RepID=D1BNB8_VEIPT
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L1_008_241G1_scaffold_523_28
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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35113..35451
DNA (339bp) protein (113aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=5 Tax=Veillonella RepID=C4FPK8_9FIRM
6-pyruvoyl-tetrahydropterin synthase
L1_008_241G1_scaffold_523_29
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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35438..36172
DNA (735bp) protein (245aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2V1_9FIRM
radical SAM protein
L1_008_241G1_scaffold_523_30
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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36254..36811
DNA (558bp) protein (186aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
GTP cyclohydrolase 1 n=3 Tax=Veillonella RepID=D1YS14_9FIRM
GTP cyclohydrolase I
Displaying items 1-30 of 32 in total

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