ggKbase home page

L1_008_241G1_scaffold_581

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_581_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2..448
DNA (447bp) protein (149aa)
30S ribosomal protein S2 n=5 Tax=Bifidobacterium breve RepID=F9Y0U3_BIFBU
rpsB; SSU ribosomal protein S2P
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_241G1_scaffold_581_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

530..1381
DNA (852bp) protein (284aa)
Elongation factor Ts n=4 Tax=Bifidobacterium breve RepID=F9Y0U2_BIFBU
Protein Translation Elongation Factor Ts (EF-Ts)
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_241G1_scaffold_581_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1557..2297
DNA (741bp) protein (247aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Uridylate kinase n=5 Tax=Bifidobacterium breve RepID=F9Y0U1_BIFBU
Uridylate kinase
L1_008_241G1_scaffold_581_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2360..2911
DNA (552bp) protein (184aa)
Ribosome-recycling factor n=4 Tax=Bifidobacterium breve RepID=F6C9A0_BIFBA
Ribosome Recycling Factor (RRF)
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_581_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2936..3922
DNA (987bp) protein (329aa)
Phosphatidate cytidylyltransferase n=5 Tax=Bifidobacterium breve RepID=F6C9A1_BIFBA
Phosphatidate cytidylyltransferase
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:AHJ19441.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_241G1_scaffold_581_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3948..5117
DNA (1170bp) protein (390aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZEV7_BIFBR
Radical SAM family enzyme
L1_008_241G1_scaffold_581_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5118..5543)
DNA (426bp) protein (142aa)
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein n=1 Tax=Bifidobacterium breve RepID=UPI0002DAF9BD
DJ-1/PfpI family protein {ECO:0000313|EMBL:ERI87216.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ThiJ/PfpI domain-containing protein
L1_008_241G1_scaffold_581_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5835..6605
DNA (771bp) protein (257aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Imidazole glycerol phosphate synthase subunit HisF n=5 Tax=Bifidobacterium breve RepID=F6C9A3_BIFBA
hisF; Imidazole glycerol phosphate synthase, cyclase subunit
L1_008_241G1_scaffold_581_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6688..7083
DNA (396bp) protein (132aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Phosphoribosyl-AMP cyclohydrolase n=2 Tax=Bifidobacterium breve RepID=F6C9A4_BIFBA
Phosphoribosyl-AMP cyclohydrolase
L1_008_241G1_scaffold_581_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7293..8849
DNA (1557bp) protein (519aa)
trpE; Anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=2 Tax=Bifidobacterium breve RepID=F9Y0T5_BIFBU
Anthranilate synthase component I {ECO:0000313|EMBL:ERI87220.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_241G1_scaffold_581_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8972..9574
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4E0_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95775.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_241G1_scaffold_581_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9558..10574)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=D4BPU3_BIFBR
Conserved hypothetical membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EPD74927.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_241G1_scaffold_581_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10772..11200
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0T2_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21260.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_581_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11266..11727)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BPU1_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87224.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Hypothetical protein with DUF488 domain
L1_008_241G1_scaffold_581_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11917..12156
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C9B0_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26386.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_581_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12399..13979)
DNA (1581bp) protein (527aa)
Amino acid permease n=2 Tax=Bifidobacterium breve RepID=D4BPT7_BIFBR
Amino acid permease {ECO:0000313|EMBL:EFE89674.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Amino acid permease
L1_008_241G1_scaffold_581_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14303..14566)
DNA (264bp) protein (88aa)
Putative transport protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MTK6_BIFL1
transport protein
Putative transport protein {ECO:0000313|EMBL:CCY96502.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Displaying 17 items

View Taxonomy