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L1_008_241G1_scaffold_597

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_597_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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58..1731
DNA (1674bp) protein (558aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PKJ6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74447.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_241G1_scaffold_597_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1890..2114
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8US05_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16980.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_241G1_scaffold_597_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2185..3156)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EAS1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16979.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Xylose isomerase-like TIM barrel.
L1_008_241G1_scaffold_597_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3184..4047)
DNA (864bp) protein (288aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJF1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19781.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Domain of Unknown Function (DUF1080).
L1_008_241G1_scaffold_597_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4095..5582)
DNA (1488bp) protein (496aa)
Tat pathway signal sequence domain protein n=3 Tax=Bacteroides RepID=A5ZJF0_9BACE
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EIY16977.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
dehydrogenase
L1_008_241G1_scaffold_597_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5594..6706)
DNA (1113bp) protein (371aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Bacteroides caccae RepID=A5ZJE9_9BACE
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EDM19779.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
oxidoreductase
L1_008_241G1_scaffold_597_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6939..8600)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJE8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74441.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
regulatory protein
L1_008_241G1_scaffold_597_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8678..9121)
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EAR7_9BACE
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
LSU ribosomal protein L9P
L1_008_241G1_scaffold_597_9
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9136..9408)
DNA (273bp) protein (91aa)
30S ribosomal protein S18 n=9 Tax=Bacteroides RepID=A5ZJE6_9BACE
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
30S ribosomal protein S18
L1_008_241G1_scaffold_597_10
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9411..9755)
DNA (345bp) protein (115aa)
30S ribosomal protein S6 n=4 Tax=Bacteroides RepID=A5ZJE5_9BACE
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
SSU ribosomal protein S6P
L1_008_241G1_scaffold_597_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9916..10362
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=4 Tax=Bacteroides RepID=A5ZJE4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72884.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
MarR family transcriptional regulator
L1_008_241G1_scaffold_597_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10503..10679
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZJE3_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDM19773.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_241G1_scaffold_597_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10758..11459)
DNA (702bp) protein (234aa)
Two-component system response regulator n=8 Tax=Bacteroides RepID=Q8A5S3_BACTN
two-component system response regulator
Transcriptional regulatory protein rprY {ECO:0000313|EMBL:EIY16969.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_241G1_scaffold_597_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11461..13008)
DNA (1548bp) protein (516aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJE0_9BACE
two-component system sensor histidine kinase
L1_008_241G1_scaffold_597_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13274..14194)
DNA (921bp) protein (307aa)
Translation elongation factor G n=2 Tax=Bacteroides caccae RepID=A5ZJD9_9BACE
Translation elongation factor G {ECO:0000313|EMBL:EIY16967.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
fusA; elongation factor G
Displaying 15 items

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