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L1_008_241G1_scaffold_610

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_610_1
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..324)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83546.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L1_008_241G1_scaffold_610_2
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(317..484)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2Z465_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64742.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
L1_008_241G1_scaffold_610_3
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(465..650)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RH68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32332.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L1_008_241G1_scaffold_610_4
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(647..802)
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZQ46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87919.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L1_008_241G1_scaffold_610_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(825..1019)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UYB3_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES48208.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L1_008_241G1_scaffold_610_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1034..1267)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L3R2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14252.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_241G1_scaffold_610_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1506..1868)
DNA (363bp) protein (121aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5UAQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68256.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_610_8
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2104..2505)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MBG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68036.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L1_008_241G1_scaffold_610_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2507..3070)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TR40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68258.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_610_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3177..3614)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TY42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68259.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_610_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3611..4759)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68260.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_610_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4760..6727)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68261.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_610_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6724..7179)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68262.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_610_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7172..7609)
DNA (438bp) protein (146aa)
Ribonuclease HI (EC:3.1.26.4)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TR44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68263.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_610_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7611..8333)
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYH5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20169.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L1_008_241G1_scaffold_610_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8495..8779)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68265.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_610_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8801..8959)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68266.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_610_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8916..9140)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C097_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48518.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_008_241G1_scaffold_610_19
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9165..9317)
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XGP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82117.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L1_008_241G1_scaffold_610_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9378..9563)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYH1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48520.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_008_241G1_scaffold_610_21
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9693..9998
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Bacillus thuringiensis RepID=J3V9A3_BACTU
hypothetical protein
YjcQ family protein {ECO:0000313|EMBL:AJH05318.1}; TaxID=1452729 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis HD1002.;"
L1_008_241G1_scaffold_610_22
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9990..10220)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6C1N2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA69395.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L1_008_241G1_scaffold_610_23
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10238..10420)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NXT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11061.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L1_008_241G1_scaffold_610_24
unknown

Not on your lists

10848..11027
DNA (180bp) protein (60aa)

This feature has no annotations

L1_008_241G1_scaffold_610_25
unknown

Not on your lists

comp(11002..11196)
DNA (195bp) protein (65aa)

This feature has no annotations

L1_008_241G1_scaffold_610_26
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11301..11555)
DNA (255bp) protein (85aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q2K9_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK50586.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L1_008_241G1_scaffold_610_27
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11678..12316
DNA (639bp) protein (213aa)
Putative repressor LexA n=1 Tax=Eubacterium sp. CAG:156 RepID=R5ZK71_9FIRM
Putative repressor LexA {ECO:0000313|EMBL:CDA29302.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
SOS-response transcriptional repressor, LexA
L1_008_241G1_scaffold_610_28
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12381..13397
DNA (1017bp) protein (339aa)
Abortive infection bacteriophage resistance protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TMP3_9FIRM
Abortive infection bacteriophage resistance protein {ECO:0000313|EMBL:CCZ64574.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Abortive infection bacteriophage resistance protein
Displaying 28 items

View Taxonomy