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L1_008_241G1_scaffold_616

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_616_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..483)
DNA (483bp) protein (161aa)
Uncharacterized protein n=5 Tax=root RepID=C6Z7I9_9BACE
Cna B-type domain protein {ECO:0000313|EMBL:KDS44925.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
OmpA-like protein
L1_008_241G1_scaffold_616_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(597..1481)
DNA (885bp) protein (295aa)
Uncharacterized protein n=5 Tax=root RepID=C6Z7I9_9BACE
OmpA-like protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05219.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_241G1_scaffold_616_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1850..2938)
DNA (1089bp) protein (363aa)
Heme ABC exporter, ATP-binding protein CcmA {ECO:0000313|EMBL:KDS44927.1}; EC=3.6.3.41 {ECO:0000313|EMBL:KDS44927.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
ChvD family ATP-binding cassette protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I8W3_9BACE
ABC transporter ATP-binding protein
L1_008_241G1_scaffold_616_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2889..3434)
DNA (546bp) protein (182aa)
ABC transporter ATP-binding protein n=5 Tax=Bacteroides RepID=A6L3Y4_BACV8
ABC transporter ATP-binding protein
ChvD family ATP-binding cassette protein {ECO:0000313|EMBL:EOS05218.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_241G1_scaffold_616_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3472..4638)
DNA (1167bp) protein (389aa)
Transporter, major facilitator family protein n=6 Tax=Bacteroides RepID=C6Z7I7_9BACE
sugar transporter
Putative sugar transporter {ECO:0000313|EMBL:ABR40397.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_241G1_scaffold_616_6
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4653..5474)
DNA (822bp) protein (274aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=3 Tax=Bacteroides RepID=C6Z7I6_9BACE
3-methyl-2-oxobutanoate hydroxymethyltransferase
L1_008_241G1_scaffold_616_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5527..6177)
DNA (651bp) protein (217aa)
HAD hydrolase, family IA, variant 3 n=3 Tax=Bacteroides vulgatus RepID=D4V978_BACVU
phosphatase/phosphohexomutase
Putative phosphatase/phosphohexomutase {ECO:0000313|EMBL:ABR40395.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_241G1_scaffold_616_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6267..7619
DNA (1353bp) protein (451aa)
MATE efflux family protein n=7 Tax=Bacteroides RepID=C6Z7I4_9BACE
hypothetical protein
MATE efflux family protein {ECO:0000313|EMBL:EIY83154.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_241G1_scaffold_616_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7616..8953
DNA (1338bp) protein (446aa)
Potassium/proton antiporter n=7 Tax=Bacteroides RepID=C6Z7I3_9BACE
cvrA, nhaP2, ycgO; potassium/proton antiporter
Uncharacterized protein {ECO:0000313|EMBL:EIY83155.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_241G1_scaffold_616_10
unknown

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8965..9084
DNA (120bp) protein (40aa)

This feature has no annotations

L1_008_241G1_scaffold_616_11
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9030..10283)
DNA (1254bp) protein (418aa)
Mn2+ and Fe2+ transport protein n=4 Tax=Bacteroides RepID=A6L3X8_BACV8
Mn2+ and Fe2+ transport protein
Putative manganese transport protein MntH {ECO:0000313|EMBL:EET16841.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_008_241G1_scaffold_616_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10386..10784
DNA (399bp) protein (133aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3X7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05211.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_241G1_scaffold_616_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10768..12030)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9ULA2_BACVU
Clostripain family protein {ECO:0000313|EMBL:KDS44935.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
clostripain-related protein
L1_008_241G1_scaffold_616_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12041..12436)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7NYA5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS32317.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_008_241G1_scaffold_616_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12658..13518)
DNA (861bp) protein (287aa)
RNA polymerase sigma factor rpoD n=16 Tax=Bacteroides RepID=A6L3X4_BACV8
RNA polymerase sigma factor rpoD
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:ABR40388.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_241G1_scaffold_616_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13758..15281)
DNA (1524bp) protein (508aa)
Serine protease n=7 Tax=Bacteroides RepID=A6L3X3_BACV8
serine protease
Protease Do {ECO:0000313|EMBL:EIY83161.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_241G1_scaffold_616_17
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15603..16190)
DNA (588bp) protein (196aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3X2_BACV8
hypothetical protein
Inner membrane family protein {ECO:0000313|EMBL:CDF17021.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_241G1_scaffold_616_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16286..17122)
DNA (837bp) protein (279aa)
Transcriptional regulator n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NY21_9BACE
Transcriptional regulator {ECO:0000313|EMBL:CDF17022.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
transcriptional regulator
L1_008_241G1_scaffold_616_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17460..20597
DNA (3138bp) protein (1046aa)
Sensor histidine kinase/response regulator n=3 Tax=Bacteroides RepID=D4V966_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS05204.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
two-component hybrid sensor kinase/response regulator
L1_008_241G1_scaffold_616_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21060..22400)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z7H2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS32310.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_008_241G1_scaffold_616_21
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22409..22531)
DNA (123bp) protein (41aa)
Polygalacturonase (Pectinase) n=4 Tax=Bacteroides RepID=C6Z7H1_9BACE
polygalacturonase
Glycoside hydrolase family 28 {ECO:0000313|EMBL:EFV65814.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Displaying 21 items

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