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L1_008_241G1_scaffold_647

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_647_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..937)
DNA (936bp) protein (312aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=3 Tax=Bacteroides RepID=A5ZK23_9BACE
L1_008_241G1_scaffold_647_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(934..2007)
DNA (1074bp) protein (358aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase n=3 Tax=Bacteroides RepID=A5ZK22_9BACE
L1_008_241G1_scaffold_647_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2034..2684)
DNA (651bp) protein (217aa)
PASTA domain protein n=3 Tax=Bacteroides RepID=A5ZK21_9BACE
PASTA domain protein {ECO:0000313|EMBL:EDM19509.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_241G1_scaffold_647_4
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3058..3219)
DNA (162bp) protein (54aa)
50S ribosomal protein L34 n=27 Tax=Bacteroides RepID=RL34_BACTN
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L1_008_241G1_scaffold_647_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3413..3979
DNA (567bp) protein (189aa)
Elongation factor P n=3 Tax=Bacteroides RepID=A5ZK19_9BACE
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
translation elongation factor P (EF-P)
L1_008_241G1_scaffold_647_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4082..5482
DNA (1401bp) protein (467aa)
Alkaline phosphatase (EC:3.1.3.1)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9EBV5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72727.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_241G1_scaffold_647_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5561..6325)
DNA (765bp) protein (255aa)
hypothetical protein (EC:3.6.1.-)
UDP-2 3-diacylglucosamine hydrolase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3R2_9BACE
UDP-2 3-diacylglucosamine hydrolase {ECO:0000313|EMBL:CCZ72728.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_241G1_scaffold_647_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6322..6633)
DNA (312bp) protein (104aa)
FeS assembly SUF system protein n=3 Tax=Bacteroides RepID=I9PLP8_9BACE
FeS assembly SUF system protein {ECO:0000313|EMBL:EIY17391.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_241G1_scaffold_647_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6749..7444)
DNA (696bp) protein (232aa)
DNA repair protein RadC n=2 Tax=Bacteroides caccae RepID=A5ZK15_9BACE
DNA repair protein RadC {ECO:0000313|EMBL:EDM19503.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
DNA repair protein
L1_008_241G1_scaffold_647_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7759..8748)
DNA (990bp) protein (330aa)
Glycosyltransferase, group 2 family protein n=3 Tax=Bacteroides RepID=A5ZK14_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72731.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L1_008_241G1_scaffold_647_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8890..10089)
DNA (1200bp) protein (400aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=3 Tax=Bacteroides RepID=A5ZK13_9BACE
L1_008_241G1_scaffold_647_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10117..11136)
DNA (1020bp) protein (340aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:EDM19500.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EDM19500.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
phosphotransacetylase (EC:2.3.1.8)
Phosphate acetyltransferase n=3 Tax=Bacteroides RepID=A5ZK12_9BACE
L1_008_241G1_scaffold_647_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11331..11774
DNA (444bp) protein (148aa)
LrgA family protein n=3 Tax=Bacteroides RepID=A5ZK11_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72735.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Putative effector of murein hydrolase LrgA
L1_008_241G1_scaffold_647_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11771..12466
DNA (696bp) protein (232aa)
TIGR00659 family protein n=2 Tax=Bacteroides RepID=I8UWM9_9BACE
TIGR00659 family protein {ECO:0000313|EMBL:CCZ72736.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Putative effector of murein hydrolase
L1_008_241G1_scaffold_647_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12522..13079
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PM77_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72737.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
Displaying 15 items

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