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L1_008_241G1_scaffold_751

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_751_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(447..1769)
DNA (1323bp) protein (441aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Nicotinate phosphoribosyltransferase n=12 Tax=Bifidobacterium RepID=Q8G7H9_BIFLO
pncB; pncb
L1_008_241G1_scaffold_751_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2000..2626
DNA (627bp) protein (209aa)
Uncharacterized protein n=7 Tax=Bifidobacterium longum RepID=B3DTL0_BIFLD
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KEY31688.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_241G1_scaffold_751_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2710..3138)
DNA (429bp) protein (143aa)
SoxR-type transcriptional regulator n=14 Tax=Bifidobacterium RepID=B3DTL1_BIFLD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ65995.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_241G1_scaffold_751_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3312..4322
DNA (1011bp) protein (337aa)
Tas3 n=6 Tax=Bifidobacterium RepID=E4R097_BIFLM
reductase
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:KEY31690.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_241G1_scaffold_751_5
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4364..4657)
DNA (294bp) protein (98aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DTL3_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV37983.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_008_241G1_scaffold_751_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4931..5431
DNA (501bp) protein (167aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZY65_BIFLJ
pantetheine-phosphate adenylyltransferase
L1_008_241G1_scaffold_751_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5439..6329
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZY64_BIFLJ
Cell division initiation protein {ECO:0000313|EMBL:KFI72759.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L1_008_241G1_scaffold_751_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6409..7038
DNA (630bp) protein (210aa)
Putative metal-binding/nucleic acid-binding protein n=3 Tax=Bifidobacterium RepID=E4R0A1_BIFLM
metal-binding/nucleic acid-binding protein
Putative metal-binding/nucleic acid-binding protein {ECO:0000313|EMBL:CCY95760.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_008_241G1_scaffold_751_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7127..7321
DNA (195bp) protein (65aa)
50S ribosomal protein L32 n=20 Tax=Bifidobacterium RepID=RL32_BIFLD
50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_241G1_scaffold_751_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7469..8197
DNA (729bp) protein (243aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Ribonuclease 3 n=14 Tax=Bifidobacterium RepID=RNC_BIFLO
ribonuclease III
L1_008_241G1_scaffold_751_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8358..10325
DNA (1968bp) protein (656aa)
Acetolactate synthase {ECO:0000313|EMBL:AIW43335.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AIW43335.1};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
IlvB n=12 Tax=Bifidobacterium RepID=E4R0A4_BIFLM
ilvB; ilvb
L1_008_241G1_scaffold_751_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10342..10896
DNA (555bp) protein (185aa)
Acetolactate synthase small subunit n=17 Tax=Bifidobacterium RepID=B3DTM0_BIFLD
acetolactate synthase small subunit
Acetolactate synthase small subunit {ECO:0000313|EMBL:AAN24137.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_008_241G1_scaffold_751_13
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11052..11330
DNA (279bp) protein (93aa)
StbC protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XWL7_9BIFI
StbC protein {ECO:0000313|EMBL:EFV37975.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
plasmid stabilization protein
L1_008_241G1_scaffold_751_14
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11340..11660
DNA (321bp) protein (107aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Ribonuclease VapC n=18 Tax=Bifidobacterium RepID=B3DTM2_BIFLD
plasmid stabilization protein
L1_008_241G1_scaffold_751_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11713..13989)
DNA (2277bp) protein (759aa)
ATPase components of ABC transporters with duplicated ATPase domains n=11 Tax=Bifidobacterium RepID=D6DA09_BIFLN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAP82989.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
ABC transporter ATP-binding protein
L1_008_241G1_scaffold_751_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14037..14885)
DNA (849bp) protein (283aa)
Possible amidotransferase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7G6_BIFLO
amidotransferase
Possible amidotransferase {ECO:0000313|EMBL:AAN24140.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_008_241G1_scaffold_751_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14984..16633
DNA (1650bp) protein (550aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Cysteine--tRNA ligase n=13 Tax=Bifidobacterium RepID=B3DTM5_BIFLD
cysteinyl-tRNA synthetase
L1_008_241G1_scaffold_751_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16652..17560)
DNA (909bp) protein (303aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=Q8G7G4_BIFLO
Co/Zn/Cd cation transport protein
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EEI81764.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_008_241G1_scaffold_751_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17769..18263
DNA (495bp) protein (165aa)
Signal recognition particle protein n=3 Tax=Bifidobacterium longum RepID=Q8G7G3_BIFLO
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Displaying 19 items

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