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L1_008_241G1_scaffold_482_3

Organism: L1_008_241G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(1536..5126)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 1196.0
  • Bit_score: 2335
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Bifidobacterium breve RepID=UPI0003042CBB similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 1196.0
  • Bit_score: 2344
  • Evalue 0.0
mfd; Transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 1196.0
  • Bit_score: 2335
  • Evalue 0.0

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Taxonomy

Bifidobacterium breve → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3591
ATGGCCGTTGATGCGAAGACGGCTGCTGACACAGGCCACAACGCCCATCCGGATCTGATTAACGGCTCGCTCGTGGGCGTCCTGTCCAAGCTCGAGCAGGACAAGGTTTTTCATCAACTGGCGGTTGGCGACATCGAAGTGTCGGATGATGTCGACAATTCCATTTTGGCCGGTGTTCCCGAAGGATTGCGTCCGGCATTGGCCGCCGCAATCGCCCAAGGCGTGAACGGTGGGGCAGGCAAGCCGGTCGTGCTGGTTGTGGCTTCCGGCCGCGAAGCCGAGGAAACCGTGGGATCGCTGCGCTCCTGGTATGACGGCGACCCGAACGATATCGCCCAGCTCGAGGCGTGGGAAACCCTGCCTCACGAGCGCCTGAGCCCGCGCGCGGACACCGTGGCCAGCCGTATGGCCGTGTTCCGCAGACTGAAGCACCCGGACACAGGCAATGCGATGTTCGGGCCGATTCGCATCCTTGTCATGCCGATTCGCTCGTTGACTCAGCCGGTGGTCCAAGGCCTTGGCGACGTCGAACCACTCGTATTCACGGTAGGGGAGGATCTGCCGCTTGACGAGGCAGCCAAGCGACTCATCGAAAACGCCTACACGCGCGTGGAACTGGTCATGGATCGCGGCGAATTCGCCGTGCGTGGTGGCATTCTCGACGTGTTCCCACCTACCGCGCCGCACCCGGTGCGTATCGAATTCTTCGGTGACGAAATCGACACTATCAAGGAATTCCACGCTTCCGACCAGCGCACCTATGGCGAGGGTCTCAAAACCATCTGGGCCACCGCTTGCCGCGAACTGCAATTGACTGATGCCGTGCGCACCCGTGCCAAGGCCCTGATCGGTTCGATTCCCAACGCCGAAGACATGCTCGAGTCCATCGCCAACGCCATTCCGGTCGAAGGTATGGAATCTCTGATGCCCGCGCTTGCGGATCACTTGGAACCGGTGGGCTCCATGCTGCCCAAGCATGCTGTGGTGCTGCTTAGCGACCCTGAAAAACTACGCCGTTCCGCTGAAGATCTGGCCAAAACCGCCAACGAGTTCCTGGCCGCCAGCTGGCATGTGGCCGCATCCGGCCACGGCGCCGGCGCGCCCATCAGCTTTGACGAAGCCAGTTTCCTTGACTATGCGGAAACCATCAGTTCGCTCGAGTATTCCGAGCACCCGGTGATTCGCCTGACGAGTTTCGGTGTAGACACCACGCTGGCCGGCCATGTGCAGCTCGACGCGCAAAACCCAGCCGAATTCCGCGGCGATGAAGCCAAGGCCTCACAAGGAATCGACGGCCTGTTGGATGCTGGCTTCCACGTCACCATTACCGCTGCTGCCGCCGGTACCTTGGCTCGTCTGAAGCGTGCGCTCAACACCACCGGCATCACCACGTTCGATACCATCCGGTCTCAGGCTATCGATGGATTCGTGGACAATGCCGCCAAAATCGCCCTGCTCACCGAACGCGACCTGACCGGTCGAAGCTCTGCGGTTGCTGTGGCCAAAACGCCGAAACGCCGGCGCAAGGCCATCGACTTAGTGGAACTCAAAAAAGGCGATTACGTGGTGCATGAGCAGCACGGCATCGGCCGGTTCATCGAAATGCGCCAGCGCGCCATCGGCACCGGCGCCAACAAAACCACCCGCGAATACCTGGTCATCGAATACGCGCCTTCCAAGCGCGGTGCACCGGCGGACAAACTGTTCATCCCCACCGACCAGCTCGACCAGGTCAGCAAATACATCGGTGCCGAAGCCCCCAAGCTCAACAAACTCGGCGGCTCCGACTGGGCGGCCACCAAGGCCAAGGCCCGCAAGCACGTCCATGAGATCGCCGACGACCTAATCAAGCTGTACTCCGCCCGCCAGCGCGCCAAAGGCTTTGCATTCAGCCCAGACACCCCGTGGCAGAAAGAACTGGAAGACGCCTTCCCCTATCAGGAAACCGCCGACCAGCTCACCACTATTGACGAAGTCAAGTCCGACATGGAAAAGCCCGTGCCCATGGACCGTCTTATCTGCGGTGATGTGGGCTTCGGCAAAACCGAAATCGCCGTACGTGCCGCATTCAAAGCCGTACAGGACGGCAAGCAGGTGGCGGTGCTCGTGCCCACCACTTTGCTCGTTCAACAGCATCAGGAAACCTTCACCGACCGCTTTGAAGGATTCCCGGTGAATGTGGCCGCCATGAGCCGCTTCCAAACCACCAAGGAGATCAACGCGACCATCGAAGGCCTGGAAAACGGCACGGTGGACGTGGTCATCGGCACACACAAACTGCTGAACCCGAAAATCAAGTTCAAGGATTTGGGACTCGTCATCATCGACGAGGAGCAGCGTTTCGGCGTGGAACACAAGGAAACGCTGAAAGCCCTGCGCACCAACGTGGACGTGCTATCCCTGTCCGCCACGCCTATTCCGCGTACGTTGGAAATGGCCGTGACCGGCATTCGTGAGATGTCCACGCTCGCCACACCGCCCGAAGACCGCCTGCCGGTGCTGACCTATGTGGGTGCCTACGAGGACGCGCAGGTCACCGCGGCCGTACGCCGGGAACTGCTGCGCGGCGGCCAGGTGTTCTATGTGCACAACCGCGTGCAGGACATCTCGTCCATCGCTGACAAGATTCACACGCTGGTGCCCGAGTCGCGCGTCGGCATCGCCCACGGCAAGATGGGGGAGAAGCAGCTCGACCAGATTATCCGCGACTTCTGGCATCGCGACATCGATGTGCTCGTATGCACCACGATCATCGAAACCGGTCTTGATATCTCCAATGCGAACACGCTGATCGTGGACCATGCCGACCGTTTCGGTCTGAGCCAGCTTCATCAGTTGCGTGGCCGCGTTGGTCGTGGCCGCGAGCGTGCGTACGCCTACTTCCTGTATGACCCGTCCAAGCCGATGACCGAGCAGTCGCACGACCGACTCGCCACCATTGCGCAGAACACGGCGCTCGGCTCCGGCTTCGACGTGGCCATGAAGGATTTGGAACTGCGTGGCACCGGCAACCTGCTGGGTGACGAGCAGTCCGGCCATATCGAGGGCGTCGGCTTCGACCTGTATGTGCGCATGGTCTCCGAAGCCGTTGAAAAATACAAGGAACCCGATGAGGACGTCGAGCCGGTGTCCGTGTCCATCGATCTGCCTATCGAGGCGTCGATTCCGATTGACTACATCGATTCCGACAAGCTGCGTTTGGAGGCATACCGCAAGCTCGCTTCCGCACGCAATGAAGCCGACCTCAAGGATTTGAAAGAAGAACTCACCGACCGTTACGGCAAGCCTCCGGTCGAATTCGAAACCCTCTTCGACGTGGCTCGCTTGAAGTTCAAGGCGCGCAAGCTCGGCGTTTCGGAGATTCTGGCGCAATCCAACCGCGTGCGTATCGGACGCATTGACCCGCCCGAATCCATTCAGATGCGCATGACGAGAATCTACAAGGGCACCCAATACCGCCCGGTCACTCACCAGCTCATCGTCCCCACCCCGTTCACCGGCTCCCTGGGCCAAGGTCCCATGAGTTCCGATCAAGTAGTTCTTTGGACCAATCAGCTCCTCGATGACTTGGCATGGAGGCCACAACGATGA
PROTEIN sequence
Length: 1197
MAVDAKTAADTGHNAHPDLINGSLVGVLSKLEQDKVFHQLAVGDIEVSDDVDNSILAGVPEGLRPALAAAIAQGVNGGAGKPVVLVVASGREAEETVGSLRSWYDGDPNDIAQLEAWETLPHERLSPRADTVASRMAVFRRLKHPDTGNAMFGPIRILVMPIRSLTQPVVQGLGDVEPLVFTVGEDLPLDEAAKRLIENAYTRVELVMDRGEFAVRGGILDVFPPTAPHPVRIEFFGDEIDTIKEFHASDQRTYGEGLKTIWATACRELQLTDAVRTRAKALIGSIPNAEDMLESIANAIPVEGMESLMPALADHLEPVGSMLPKHAVVLLSDPEKLRRSAEDLAKTANEFLAASWHVAASGHGAGAPISFDEASFLDYAETISSLEYSEHPVIRLTSFGVDTTLAGHVQLDAQNPAEFRGDEAKASQGIDGLLDAGFHVTITAAAAGTLARLKRALNTTGITTFDTIRSQAIDGFVDNAAKIALLTERDLTGRSSAVAVAKTPKRRRKAIDLVELKKGDYVVHEQHGIGRFIEMRQRAIGTGANKTTREYLVIEYAPSKRGAPADKLFIPTDQLDQVSKYIGAEAPKLNKLGGSDWAATKAKARKHVHEIADDLIKLYSARQRAKGFAFSPDTPWQKELEDAFPYQETADQLTTIDEVKSDMEKPVPMDRLICGDVGFGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHQETFTDRFEGFPVNVAAMSRFQTTKEINATIEGLENGTVDVVIGTHKLLNPKIKFKDLGLVIIDEEQRFGVEHKETLKALRTNVDVLSLSATPIPRTLEMAVTGIREMSTLATPPEDRLPVLTYVGAYEDAQVTAAVRRELLRGGQVFYVHNRVQDISSIADKIHTLVPESRVGIAHGKMGEKQLDQIIRDFWHRDIDVLVCTTIIETGLDISNANTLIVDHADRFGLSQLHQLRGRVGRGRERAYAYFLYDPSKPMTEQSHDRLATIAQNTALGSGFDVAMKDLELRGTGNLLGDEQSGHIEGVGFDLYVRMVSEAVEKYKEPDEDVEPVSVSIDLPIEASIPIDYIDSDKLRLEAYRKLASARNEADLKDLKEELTDRYGKPPVEFETLFDVARLKFKARKLGVSEILAQSNRVRIGRIDPPESIQMRMTRIYKGTQYRPVTHQLIVPTPFTGSLGQGPMSSDQVVLWTNQLLDDLAWRPQR*