ggKbase home page

L1_008_241G1_scaffold_482

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_482_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..477)
DNA (477bp) protein (159aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Enolase n=6 Tax=Bifidobacterium breve RepID=F6CA72_BIFBA
Enolase
L1_008_241G1_scaffold_482_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(628..1539)
DNA (912bp) protein (304aa)
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Bifidobacterium breve RepID=U2CDA1_BIFBR
Oxidoreductase, aldo-keto reductase family
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:ERI88479.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_008_241G1_scaffold_482_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1536..5126)
DNA (3591bp) protein (1197aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
transcription-repair coupling factor n=1 Tax=Bifidobacterium breve RepID=UPI0003042CBB
mfd; Transcription-repair coupling factor
L1_008_241G1_scaffold_482_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5116..5715)
DNA (600bp) protein (200aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Peptidyl-tRNA hydrolase n=4 Tax=Bifidobacterium breve RepID=F9XY83_BIFBU
Peptidyl-tRNA hydrolase
L1_008_241G1_scaffold_482_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5764..6273)
DNA (510bp) protein (170aa)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNM1_BIFBR
Phosphinothricin N-acetyltransferase
Phosphinothricin N-acetyltransferase {ECO:0000313|EMBL:AHJ20903.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_241G1_scaffold_482_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6407..9664)
DNA (3258bp) protein (1086aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6CA77_BIFBA
Hypothetical membrane spanning protein in uncharacterized protein family (UPF0182)
UPF0182 protein HMPREF9228_1140 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_482_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9826..11112
DNA (1287bp) protein (429aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6CA78_BIFBA
glycoside hydrolase, family 3 domain protein
L1_008_241G1_scaffold_482_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11133..11861)
DNA (729bp) protein (243aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNL7_BIFBR
Nicotinate-nucleotide adenylyltransferase
L1_008_241G1_scaffold_482_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11858..12421)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6CA80_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26586.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_241G1_scaffold_482_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12418..13713)
DNA (1296bp) protein (432aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Gamma-glutamyl phosphate reductase n=2 Tax=Bifidobacterium breve RepID=F6CA81_BIFBA
Gamma-glutamyl phosphate reductase
L1_008_241G1_scaffold_482_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14100..15590
DNA (1491bp) protein (497aa)
thrC; Threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000313|EMBL:ABE95402.1}; EC=4.2.3.1 {ECO:0000313|EMBL:ABE95402.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Threonine synthase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XY77_BIFBU
L1_008_241G1_scaffold_482_12
unknown

Not on your lists

comp(15969..16214)
DNA (246bp) protein (82aa)

This feature has no annotations

L1_008_241G1_scaffold_482_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16723..17091)
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BNL2_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE89249.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Displaying 13 items

View Taxonomy