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L1_008_364G1_scaffold_45

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_45_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47..3226
DNA (3180bp) protein (1060aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V9F5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50247.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L1_008_364G1_scaffold_45_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3237..6881
DNA (3645bp) protein (1215aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V9F6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KEY23411.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L1_008_364G1_scaffold_45_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6878..7972
DNA (1095bp) protein (365aa)
Putative transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen {ECO:0000313|EMBL:KFI66591.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KFI66591.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Divergent AAA domain protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FEM8_9BIFI
ATP-binding protein
L1_008_364G1_scaffold_45_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7956..8378
DNA (423bp) protein (141aa)
Putative transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M425_BIFBI
ATP-binding protein
ATP-binding protein {ECO:0000313|EMBL:AIW44528.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_008_364G1_scaffold_45_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8375..10981
DNA (2607bp) protein (869aa)
TIGR02687 family protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V9F8_BIFBI
TIGR02687 family protein {ECO:0000313|EMBL:EFR50250.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L1_008_364G1_scaffold_45_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11008..13257
DNA (2250bp) protein (750aa)
TIGR02688 family protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FEN0_9BIFI
ATP-dependent Lon protease {ECO:0000313|EMBL:AIW44530.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
ATP-dependent Lon protease
L1_008_364G1_scaffold_45_7
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13409..13630
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Bifidobacterium animalis subsp. lactis ATCC 27673 RepID=U3Q076_BIFAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ15560.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L1_008_364G1_scaffold_45_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13732..14625)
DNA (894bp) protein (298aa)
Transcriptional regulator, AraC family n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5U4_9BIFI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFM42018.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
AraC family transcriptional regulator
L1_008_364G1_scaffold_45_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14743..15123
DNA (381bp) protein (127aa)
Glyoxalase family protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5U5_9BIFI
Glyoxalase-like domain protein {ECO:0000313|EMBL:ETO96156.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_364G1_scaffold_45_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15286..15897
DNA (612bp) protein (204aa)
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EFM42020.1}; EC=2.3.1.18 {ECO:0000313|EMBL:EFM42020.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Bacterial transferase hexapeptide repeat protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5U6_9BIFI
galactoside O-acetyltransferase
L1_008_364G1_scaffold_45_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16125..16886
DNA (762bp) protein (254aa)
hydrolase (EC:2.3.1.31)
Hydrolase, alpha/beta fold family, putative {ECO:0000313|EMBL:ADB09973.1}; EC=2.3.1.31 {ECO:0000313|EMBL:ADB09973.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Hydrolase, alpha/beta fold family, putative n=2 Tax=Bifidobacterium dentium RepID=D2QAY7_BIFDB
L1_008_364G1_scaffold_45_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17000..17467)
DNA (468bp) protein (156aa)
ATPase (EC:3.6.1.15)
Macro domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S8Z1_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27291.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_364G1_scaffold_45_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17616..18641)
DNA (1026bp) protein (342aa)
adenosine deaminase (EC:3.5.4.4)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01962}; Short=ADE {ECO:0000256|HAMAP-Rule:MF_01962};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01962};; Adenine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01962}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Adenosine deaminase n=2 Tax=Bifidobacterium dentium RepID=D2QAY5_BIFDB
L1_008_364G1_scaffold_45_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18679..19146)
DNA (468bp) protein (156aa)
D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Bifidobacterium dentium RepID=E1N8E8_9BIFI
Putative D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000313|EMBL:ETO96164.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
D-tyrosyl-tRNA(Tyr) deacylase
L1_008_364G1_scaffold_45_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19362..19730
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5V1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42025.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_364G1_scaffold_45_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19830..19970
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5V2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42026.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_364G1_scaffold_45_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20116..21063
DNA (948bp) protein (316aa)
Alcohol dehydrogenase, catalytic domain protein, GroES-like family n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AUE0_BIFLN
Alcohol dehydrogenase, catalytic domain protein, GroES-like family {ECO:0000313|EMBL:ETO96309.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
alcohol dehydrogenase
L1_008_364G1_scaffold_45_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21289..22731
DNA (1443bp) protein (481aa)
Amino acid permease n=2 Tax=Bifidobacterium dentium RepID=D2QAY1_BIFDB
Amino acid permease {ECO:0000313|EMBL:ETO96218.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
amino acid permease
L1_008_364G1_scaffold_45_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22822..23628
DNA (807bp) protein (269aa)
fabG; 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.268)
FabG 3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ADB09966.1}; EC=1.1.1.268 {ECO:0000313|EMBL:ADB09966.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
FabG 3-oxoacyl-[acyl-carrier protein] reductase n=4 Tax=Bifidobacterium dentium RepID=D2QAY0_BIFDB
L1_008_364G1_scaffold_45_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23841..24194
DNA (354bp) protein (118aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S900_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09965.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_364G1_scaffold_45_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24269..24862
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N8E2_9BIFI
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFM42031.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
TetR family transcriptional regulator
L1_008_364G1_scaffold_45_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25075..25554
DNA (480bp) protein (160aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160974}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160970};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Bifidobacterium dentium RepID=E0Q5V8_9BIFI
D-tyrosyl-tRNA(Tyr) deacylase
L1_008_364G1_scaffold_45_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25578..25961)
DNA (384bp) protein (128aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=E1N8E0_9BIFI
PF04343 family protein {ECO:0000313|EMBL:ETO96146.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_364G1_scaffold_45_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26095..27087
DNA (993bp) protein (331aa)
serA2; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.290)
SerA2 D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ADB09961.1}; EC=1.1.1.290 {ECO:0000313|EMBL:ADB09961.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
SerA2 D-3-phosphoglycerate dehydrogenase n=2 Tax=Bifidobacterium dentium RepID=D2QAX5_BIFDB
L1_008_364G1_scaffold_45_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27269..28654
DNA (1386bp) protein (462aa)
MATE efflux family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5W1_9BIFI
MATE efflux family protein {ECO:0000313|EMBL:EFM42035.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Na+ driven multidrug efflux pump
L1_008_364G1_scaffold_45_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28744..29493
DNA (750bp) protein (250aa)
Ion channel n=2 Tax=Bifidobacterium dentium RepID=E0Q5W2_9BIFI
Ion channel {ECO:0000313|EMBL:EFM42036.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Potassium channel protein
L1_008_364G1_scaffold_45_27
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29545..30543)
DNA (999bp) protein (333aa)
Conserved hypothetical secreted protein n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2QAX2_BIFDB
PF07510 family protein {ECO:0000313|EMBL:ETO96216.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_364G1_scaffold_45_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30597..31433
DNA (837bp) protein (279aa)
MazG family protein n=2 Tax=Bifidobacterium dentium RepID=B1S909_9BIFI
magZ; MazG-like conserved hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27276.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_364G1_scaffold_45_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31470..33032
DNA (1563bp) protein (521aa)
aminopeptidase C (EC:3.4.22.40)
Aminopeptidase C {ECO:0000313|EMBL:ADB09956.1}; EC=3.4.22.40 {ECO:0000313|EMBL:ADB09956.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Peptidase C1-like family n=2 Tax=Bifidobacterium dentium RepID=E1N8D3_9BIFI
L1_008_364G1_scaffold_45_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33055..36915
DNA (3861bp) protein (1287aa)
SNF2 family N-terminal domain protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5W7_9BIFI
SNF2 family N-terminal domain protein {ECO:0000313|EMBL:EFM42041.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
helicase
Displaying items 1-30 of 112 in total

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