ggKbase home page

L1_008_364G1_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_82_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..169
DNA (168bp) protein (56aa)
YhgE/Pip domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9E1_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26038.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_364G1_scaffold_82_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

244..1317
DNA (1074bp) protein (358aa)
pldB; lysophospholipase PldB (EC:3.1.1.5)
Lysophospholipase PldB n=4 Tax=Bifidobacterium dentium RepID=D2Q6Z7_BIFDB
Putative lysophospholipase {ECO:0000313|EMBL:ETO96483.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_364G1_scaffold_82_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1477..2685)
DNA (1209bp) protein (403aa)
aminotransferase (EC:4.4.1.14)
Aminotransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q6Z8_BIFDB
Cystathionine beta-lyase PatB family protein {ECO:0000313|EMBL:ETO96466.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_364G1_scaffold_82_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2879..3727
DNA (849bp) protein (283aa)
Putative membrane protein n=2 Tax=Bifidobacterium dentium RepID=E1NCD7_9BIFI
hypothetical protein
Hypothetical membrane spanning protein {ECO:0000313|EMBL:ADB08745.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_364G1_scaffold_82_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4085..4714)
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S8B8_9BIFI
hypothetical protein
NAD(P)H-binding protein, PF13460 family {ECO:0000313|EMBL:ETO96470.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_364G1_scaffold_82_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4952..5275
DNA (324bp) protein (108aa)
MarR-type transcriptional regulator n=4 Tax=Bifidobacterium dentium RepID=D2Q701_BIFDB
MarR family transcriptional regulator
MarR-type transcriptional regulator {ECO:0000313|EMBL:ADB08747.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_364G1_scaffold_82_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5942..7258)
DNA (1317bp) protein (439aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q702_BIFDB
L1_008_364G1_scaffold_82_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7559..9397
DNA (1839bp) protein (613aa)
serine protease (EC:3.4.21.108)
Serine protease {ECO:0000313|EMBL:ADB08749.1}; EC=3.4.21.108 {ECO:0000313|EMBL:ADB08749.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Serine protease n=2 Tax=Bifidobacterium dentium RepID=D2Q703_BIFDB
L1_008_364G1_scaffold_82_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9744..12179
DNA (2436bp) protein (812aa)
cation-transporting ATPase (EC:3.6.3.12)
Cation-transporting ATPase n=2 Tax=Bifidobacterium dentium RepID=D2Q704_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26047.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_364G1_scaffold_82_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12474..13484)
DNA (1011bp) protein (337aa)
L-asparaginase, type I {ECO:0000313|EMBL:ETO96449.1}; EC=3.5.1.1 {ECO:0000313|EMBL:ETO96449.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L-asparaginase (EC:3.1.1.47)
L-asparaginase, type I n=2 Tax=Bifidobacterium dentium RepID=E0Q9D1_9BIFI
L1_008_364G1_scaffold_82_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13577..15094)
DNA (1518bp) protein (506aa)
Amino acid permease n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q9D0_9BIFI
Amino acid permease {ECO:0000313|EMBL:EFM40853.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
amino acid permease
L1_008_364G1_scaffold_82_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15340..17061
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q9C8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40851.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_364G1_scaffold_82_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17181..18635
DNA (1455bp) protein (485aa)
ferredoxin/ferredoxin-NADP reductase (EC:1.4.1.13)
Ferredoxin/ferredoxin-NADP reductase {ECO:0000313|EMBL:ADB08754.1}; EC=1.4.1.13 {ECO:0000313|EMBL:ADB08754.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Ferredoxin/ferredoxin-NADP reductase n=3 Tax=Bifidobacterium dentium RepID=D2Q708_BIFDB
L1_008_364G1_scaffold_82_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18862..19866
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9C6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40849.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_364G1_scaffold_82_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19996..20589
DNA (594bp) protein (198aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Protease HtpX homolog n=2 Tax=Bifidobacterium dentium RepID=E0Q9C5_9BIFI
Zn-dependent protease
L1_008_364G1_scaffold_82_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20628..21002
DNA (375bp) protein (125aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Protease HtpX homolog n=2 Tax=Bifidobacterium dentium RepID=D2Q710_BIFDB
Zn-dependent protease
L1_008_364G1_scaffold_82_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21437..22540)
DNA (1104bp) protein (368aa)
Site-specific recombinase, phage integrase family n=2 Tax=Bifidobacterium dentium RepID=E0Q9C4_9BIFI
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFM40847.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
phage integrase
L1_008_364G1_scaffold_82_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22584..23276)
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9C3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40846.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_364G1_scaffold_82_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23409..23618
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q9C2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40845.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_364G1_scaffold_82_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23731..25176
DNA (1446bp) protein (482aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9C1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40844.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
phage protein
L1_008_364G1_scaffold_82_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25581..26522
DNA (942bp) protein (314aa)
Abi-like protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9C0_9BIFI
Abi-like protein {ECO:0000313|EMBL:EFM40843.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
abi-like protein
L1_008_364G1_scaffold_82_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26964..28868)
DNA (1905bp) protein (635aa)
Pectinesterase inhibitor domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9B9_9BIFI
Pectinesterase inhibitor domain protein {ECO:0000313|EMBL:EFM40842.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_364G1_scaffold_82_23
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28883..31693)
DNA (2811bp) protein (937aa)
MMPL family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9B8_9BIFI
MMPL family protein {ECO:0000313|EMBL:EFM40841.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
membrane transport protein
L1_008_364G1_scaffold_82_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31824..33098)
DNA (1275bp) protein (425aa)
FMN oxidoreductase (EC:1.5.8.2)
Oxidoreductase, FAD/FMN-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9B7_9BIFI
Oxidoreductase, FAD/FMN-binding protein {ECO:0000313|EMBL:EFM40840.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_364G1_scaffold_82_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33377..34144
DNA (768bp) protein (256aa)
dehydrogenase (EC:1.1.1.64)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9B6_9BIFI
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFM40839.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_364G1_scaffold_82_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34205..34807
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family n=2 Tax=Bifidobacterium dentium RepID=E0Q9B5_9BIFI
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFM40838.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
TetR family transcriptional regulator
L1_008_364G1_scaffold_82_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34809..35228)
DNA (420bp) protein (140aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S896_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFM40837.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_364G1_scaffold_82_28
unknown

Not on your lists

36020..36256
DNA (237bp) protein (79aa)

This feature has no annotations

L1_008_364G1_scaffold_82_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36288..36632
DNA (345bp) protein (115aa)
Bacterial mobilization protein MobC n=4 Tax=Bifidobacterium dentium RepID=B1S893_9BIFI
hypothetical protein
Bacterial mobilization protein MobC {ECO:0000313|EMBL:EFM40834.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_364G1_scaffold_82_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36632..38521
DNA (1890bp) protein (630aa)
Mobilisation protein n=2 Tax=Bifidobacterium dentium RepID=D2Q723_BIFDB
mobilisation protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26067.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Displaying items 1-30 of 65 in total

View Taxonomy