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L1_008_364G1_scaffold_105

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_105_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..425)
DNA (423bp) protein (141aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Roseburia intestinalis RepID=D4KJF3_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL10483.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_105_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(553..885)
DNA (333bp) protein (111aa)
ABC-type sugar transport system, periplasmic component n=2 Tax=Roseburia intestinalis RepID=D4KJF2_9FIRM
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBL10482.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_105_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(833..1759)
DNA (927bp) protein (309aa)
ABC-type sugar transport system, periplasmic component n=2 Tax=Roseburia intestinalis RepID=D4KJF2_9FIRM
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBL10482.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_105_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1698..1883)
DNA (186bp) protein (62aa)
ABC-type sugar transport system, periplasmic component n=2 Tax=Roseburia intestinalis RepID=D4KJF2_9FIRM
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBL10482.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_105_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2054..3094)
DNA (1041bp) protein (347aa)
Transcriptional regulators n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJF1_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL10481.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_105_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3220..3861)
DNA (642bp) protein (214aa)
Beta-phosphoglucomutase {ECO:0000313|EMBL:EEV02601.1}; EC=5.4.2.6 {ECO:0000313|EMBL:EEV02601.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
beta-phosphoglucomutase (EC:5.4.2.6)
Beta-phosphoglucomutase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6E5_9FIRM
L1_008_364G1_scaffold_105_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4212..5063
DNA (852bp) protein (284aa)
Predicted esterase of the alpha-beta hydrolase superfamily n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJE9_9FIRM
Predicted esterase of the alpha-beta hydrolase superfamily
Predicted esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:CBL10479.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_105_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5096..6418
DNA (1323bp) protein (441aa)
Putative efflux protein, MATE family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJE8_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL10478.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_105_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6590..9172)
DNA (2583bp) protein (861aa)
ATP-dependent chaperone ClpB n=2 Tax=Roseburia intestinalis RepID=D4KJE7_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ATP-dependent chaperone ClpB
L1_008_364G1_scaffold_105_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9409..10599)
DNA (1191bp) protein (397aa)
Membrane protein Bmp family n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AT80_9FIRM
Membrane protein Bmp family {ECO:0000313|EMBL:CDA54230.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Bmp family protein
L1_008_364G1_scaffold_105_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10601..14149)
DNA (3549bp) protein (1183aa)
HD domain protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B5I1_9FIRM
HD domain protein {ECO:0000313|EMBL:CDA54231.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
uncharacterized domain HDIG
L1_008_364G1_scaffold_105_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14424..15071
DNA (648bp) protein (216aa)
Formimidoyltetrahydrofolate cyclodeaminase (EC:3.5.4.9 4.3.1.4)
Formimidoyltetrahydrofolate cyclodeaminase {ECO:0000313|EMBL:CBL12382.1}; EC=3.5.4.9 {ECO:0000313|EMBL:CBL12382.1};; EC=4.3.1.4 {ECO:0000313|EMBL:CBL12382.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Formimidoyltetrahydrofolate cyclodeaminase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYE2_9FIRM
L1_008_364G1_scaffold_105_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15151..16014
DNA (864bp) protein (288aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6F4_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_364G1_scaffold_105_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16199..17545)
DNA (1347bp) protein (449aa)
Predicted ATPase (AAA+ superfamily) n=2 Tax=Roseburia intestinalis RepID=D4KJA4_9FIRM
Predicted ATPase (AAA+ superfamily)
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CBL10434.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_105_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17745..19652)
DNA (1908bp) protein (636aa)
Mannose-6-phosphate isomerase, class I/beta-galactosidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYD8_9FIRM
Mannose-6-phosphate isomerase, class I/beta-galactosidase {ECO:0000313|EMBL:CBL12378.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
mannose-6-phosphate isomerase, class I/beta-galactosidase
L1_008_364G1_scaffold_105_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19591..20052)
DNA (462bp) protein (154aa)
Mannose-6-phosphate isomerase, class I/beta-galactosidase n=2 Tax=Roseburia intestinalis RepID=D4KJA3_9FIRM
mannose-6-phosphate isomerase, class I/beta-galactosidase
Mannose-6-phosphate isomerase class I/beta-galactosidase {ECO:0000313|EMBL:CDA54236.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_364G1_scaffold_105_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20077..21195)
DNA (1119bp) protein (373aa)
GDSL-like protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6F8_9FIRM
Lysophospholipase L1 and related esterases
GDSL-like protein {ECO:0000313|EMBL:EEV02614.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_364G1_scaffold_105_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21234..22283)
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KYD6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12376.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_364G1_scaffold_105_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22484..23506)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02551.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted glycosylase
L1_008_364G1_scaffold_105_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23589..24767)
DNA (1179bp) protein (393aa)
4-O-beta-D-mannosyl-D-glucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928}; Short=MGP {ECO:0000256|HAMAP-Rule:MF_00928};; Short=Mannosylglucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928};; EC=2.4.1.281 {ECO:0000256|HAMAP-Rule:MF_00928};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
4-O-beta-D-mannosyl-D-glucose phosphorylase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6G2_9FIRM
Predicted glycosylase
L1_008_364G1_scaffold_105_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24811..26040)
DNA (1230bp) protein (410aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Cellobiose 2-epimerase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AZK6_9FIRM
N-acyl-D-glucosamine 2-epimerase
L1_008_364G1_scaffold_105_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26062..26937)
DNA (876bp) protein (292aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYD2_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL12372.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_364G1_scaffold_105_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26942..27946)
DNA (1005bp) protein (335aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Roseburia intestinalis RepID=D4KJ96_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL12371.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_364G1_scaffold_105_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28018..29487)
DNA (1470bp) protein (490aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=3 Tax=Roseburia RepID=D4KYD0_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDA54248.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_364G1_scaffold_105_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30851..31876)
DNA (1026bp) protein (342aa)
Transcriptional regulators n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYC9_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL12369.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_364G1_scaffold_105_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31919..34108)
DNA (2190bp) protein (730aa)
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BEX1_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CDA57611.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_364G1_scaffold_105_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34125..35843)
DNA (1719bp) protein (573aa)
alpha-phosphoglucomutase (EC:5.4.2.2 5.4.2.8)
Phosphoglucomutase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B3H1_9FIRM
Phosphoglucomutase {ECO:0000313|EMBL:CDA57610.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_364G1_scaffold_105_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35975..36910)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B9M8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA57609.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_364G1_scaffold_105_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37056..37952
DNA (897bp) protein (299aa)
Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6H1_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEV02561.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
AraC-type DNA-binding domain-containing proteins
L1_008_364G1_scaffold_105_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37946..39064)
DNA (1119bp) protein (373aa)
CAAX amino terminal protease family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJ89_9FIRM
CAAX amino terminal protease family.
CAAX amino terminal protease family {ECO:0000313|EMBL:CBL10419.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Displaying items 1-30 of 60 in total

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