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L1_008_364G1_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_106_1
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..643
DNA (642bp) protein (214aa)
gpi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
Glucose-6-phosphate isomerase n=2 Tax=Bifidobacterium dentium RepID=E0Q8Z0_9BIFI
L1_008_364G1_scaffold_106_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


914..1279
DNA (366bp) protein (122aa)
50S ribosomal protein L19 n=4 Tax=Bifidobacterium dentium RepID=D2Q879_BIFDB
rplS; 50S ribosomal protein L19P
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_364G1_scaffold_106_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1402..2046
DNA (645bp) protein (215aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Signal peptidase I n=2 Tax=Bifidobacterium dentium RepID=E0Q8Y8_9BIFI
L1_008_364G1_scaffold_106_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2046..2750
DNA (705bp) protein (235aa)
ribonuclease (EC:3.1.26.4)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Ribonuclease n=2 Tax=Bifidobacterium dentium RepID=D2Q881_BIFDB
L1_008_364G1_scaffold_106_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3203..4003
DNA (801bp) protein (267aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM41277.1}; EC=3.6.3.28 {ECO:0000313|EMBL:EFM41277.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter ATP-binding protein (EC:3.6.3.36)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8Y5_9BIFI
L1_008_364G1_scaffold_106_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4000..5508
DNA (1509bp) protein (503aa)
ATP-binding protein of ABC transporter system n=4 Tax=Bifidobacterium dentium RepID=D2Q883_BIFDB
ABC transporter ATP-binding protein
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ETO98136.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_364G1_scaffold_106_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5528..6472)
DNA (945bp) protein (315aa)
Transporter, auxin efflux carrier (AEC) family protein n=2 Tax=Bifidobacterium dentium RepID=B1S6Z1_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26320.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
transporter
L1_008_364G1_scaffold_106_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6623..7819
DNA (1197bp) protein (399aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:ETO98275.1}; EC=3.5.1.18 {ECO:0000313|EMBL:ETO98275.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
dapE; succinyl-diaminopimelate desuccinylase (EC:3.5.1.16)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q8Y2_9BIFI
L1_008_364G1_scaffold_106_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8157..10910
DNA (2754bp) protein (918aa)
Ribonuclease, Rne/Rng family n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NDQ3_9BIFI
Ribonuclease E/G family protein {ECO:0000313|EMBL:ETO98231.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
rne; ribonuclease G
L1_008_364G1_scaffold_106_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11055..11363
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=4 Tax=Bifidobacterium dentium RepID=D2Q887_BIFDB
rplU; 50S ribosomal protein L21P
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_364G1_scaffold_106_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11404..11655
DNA (252bp) protein (84aa)
50S ribosomal protein L27 n=10 Tax=Bifidobacterium RepID=RL27_BIFAA
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L1_008_364G1_scaffold_106_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11691..13445
DNA (1755bp) protein (585aa)
GTPase Obg n=4 Tax=Bifidobacterium dentium RepID=D2Q889_BIFDB
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
GTP-binding protein, GTP1/OBG family
L1_008_364G1_scaffold_106_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13553..14686
DNA (1134bp) protein (378aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
proB; glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=2 Tax=Bifidobacterium dentium RepID=E0Q8X5_9BIFI
L1_008_364G1_scaffold_106_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14771..15994
DNA (1224bp) protein (408aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EFM41266.1}; EC=2.6.1.- {ECO:0000313|EMBL:EFM41266.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
aspC; aspartate aminotransferase (EC:4.4.1.14)
Aminotransferase, class I/II n=2 Tax=Bifidobacterium dentium RepID=E0Q8X4_9BIFI
L1_008_364G1_scaffold_106_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16334..16561
DNA (228bp) protein (76aa)
Protein translocase subunit SecE n=3 Tax=Bifidobacterium dentium RepID=D2Q892_BIFDB
secE; protein translocase subunit
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_364G1_scaffold_106_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16585..17397
DNA (813bp) protein (271aa)
Transcription termination/antitermination protein NusG n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q8X1_9BIFI
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
nusG; transcription antitermination protein nusG
L1_008_364G1_scaffold_106_17
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17698..18129
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q894_BIFDB
rplK; 50S ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
L1_008_364G1_scaffold_106_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18144..18836
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=4 Tax=Bifidobacterium dentium RepID=D2Q895_BIFDB
rplA; 50S ribosomal protein L1P
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_364G1_scaffold_106_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18977..19756)
DNA (780bp) protein (260aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S6X5_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26332.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_364G1_scaffold_106_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19851..21905
DNA (2055bp) protein (685aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8W7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41259.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_364G1_scaffold_106_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22080..22937
DNA (858bp) protein (286aa)
Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EFM41258.1}; EC=6.3.4.15 {ECO:0000313|EMBL:EFM41258.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
birA; biotin--acetyl-CoA-carboxylase ligase birA (EC:2.7.1.33)
Biotin--[acetyl-CoA-carboxylase] ligase n=2 Tax=Bifidobacterium dentium RepID=E0Q8W6_9BIFI
L1_008_364G1_scaffold_106_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23017..23598)
DNA (582bp) protein (194aa)
BioY family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8W5_9BIFI
BioY family protein {ECO:0000313|EMBL:EFM41257.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
BioY-family protein
L1_008_364G1_scaffold_106_23
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23765..25627
DNA (1863bp) protein (621aa)
Carbamoyl-phosphate synthase L chain, ATP binding domain protein {ECO:0000313|EMBL:EFM41256.1}; EC=6.3.4.14 {ECO:0000313|EMBL:EFM41256.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
accC; accC Acetyl-/propionyl-CoA carboxylase subunit alpha (EC:6.3.4.14)
Carbamoyl-phosphate synthase L chain, ATP binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8W4_9BIFI
L1_008_364G1_scaffold_106_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25624..27225
DNA (1602bp) protein (534aa)
AccD Acetyl-/propionyl-CoA carboxylase beta chain {ECO:0000313|EMBL:ADB09038.1}; EC=4.1.1.70 {ECO:0000313|EMBL:ADB09038.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
accD; accD Acetyl-/propionyl-CoA carboxylase subunit beta (EC:4.1.1.70)
AccD Acetyl-/propionyl-CoA carboxylase beta chain n=2 Tax=Bifidobacterium dentium RepID=D2Q8A2_BIFDB
L1_008_364G1_scaffold_106_25
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27292..36657
DNA (9366bp) protein (3122aa)
fas; fatty acid synthase Fas (EC:2.3.1.179)
MaoC-like protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8W2_9BIFI
PF08354 domain protein {ECO:0000313|EMBL:ETO98245.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_364G1_scaffold_106_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36891..37346
DNA (456bp) protein (152aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
holo-[acyl-carrier protein] synthase3 (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=2 Tax=Bifidobacterium dentium RepID=E0Q8W1_9BIFI
L1_008_364G1_scaffold_106_27
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37496..39310
DNA (1815bp) protein (605aa)
glycosidase (EC:2.4.1.25)
Alpha amylase, catalytic domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8W0_9BIFI
Putative amylosucrase {ECO:0000313|EMBL:ETO98074.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_364G1_scaffold_106_28
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39621..40295
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q8V9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO98175.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_364G1_scaffold_106_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


40443..40712
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=9 Tax=Bifidobacterium RepID=RS15_BIFAA
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_364G1_scaffold_106_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40943..43585
DNA (2643bp) protein (881aa)
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q8A8_BIFDB
Displaying items 1-30 of 52 in total

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