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L1_008_364G1_scaffold_149

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_149_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..786)
DNA (786bp) protein (262aa)
Cro/CI family Transcriptional regulator n=6 Tax=Firmicutes RepID=E5XH89_9FIRM
Cro/CI family Transcriptional regulator {ECO:0000313|EMBL:EFV19379.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
helix-turn-helix protein
L1_008_364G1_scaffold_149_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1200..1955)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G8Q7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46061.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L1_008_364G1_scaffold_149_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2378..2824)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C924_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90746.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L1_008_364G1_scaffold_149_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2930..3067)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81540.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
transcriptional regulator
L1_008_364G1_scaffold_149_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3536..5074)
DNA (1539bp) protein (513aa)
Asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR31_9CLOT
Putative asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EEA81539.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_364G1_scaffold_149_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5190..6509)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81538.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
membrane protein
L1_008_364G1_scaffold_149_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6482..8161)
DNA (1680bp) protein (560aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FR29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22045.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ATPase component of various ABC-type transport systems
L1_008_364G1_scaffold_149_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8134..9027)
DNA (894bp) protein (298aa)
Cobalt transport protein n=2 Tax=Clostridium RepID=B6FR28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22044.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cbiQ4; cobalt ABC transport system permease protein CbiQ4
L1_008_364G1_scaffold_149_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9014..9856)
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81535.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_364G1_scaffold_149_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9840..12503)
DNA (2664bp) protein (888aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR26_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22042.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_364G1_scaffold_149_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12506..15988)
DNA (3483bp) protein (1161aa)
Bacterial group 2 Ig-like protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR25_9CLOT
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:EEA81533.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_364G1_scaffold_149_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16452..17198)
DNA (747bp) protein (249aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase family protein n=2 Tax=Clostridium RepID=B6FR24_9CLOT
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EEA81532.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_364G1_scaffold_149_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17264..18046)
DNA (783bp) protein (261aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FR23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22038.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_364G1_scaffold_149_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18043..19029)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QJD8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22037.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type Fe3+-siderophore transport system, permease component
L1_008_364G1_scaffold_149_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19026..19916)
DNA (891bp) protein (297aa)
Heme ABC transporter, heme-binding protein isdE n=2 Tax=Clostridium RepID=B6FR21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22035.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
heme ABC transporter, heme-binding protein isdE
L1_008_364G1_scaffold_149_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19920..20639)
DNA (720bp) protein (240aa)
Iron transport-associated domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR20_9CLOT
Iron transport-associated domain protein {ECO:0000313|EMBL:EEA81528.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_364G1_scaffold_149_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20641..22290)
DNA (1650bp) protein (550aa)
Iron transport-associated domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR19_9CLOT
Iron transport-associated domain protein {ECO:0000313|EMBL:EEA81527.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
beta-N-acetylglucosaminidase
L1_008_364G1_scaffold_149_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22513..23283)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22030.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
manganese transport regulator MntR
L1_008_364G1_scaffold_149_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23288..23683)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22028.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_364G1_scaffold_149_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23774..24355)
DNA (582bp) protein (194aa)
Peptidase propeptide and YPEB domain protein n=2 Tax=Clostridium RepID=B6FR16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22027.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_364G1_scaffold_149_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24466..25830)
DNA (1365bp) protein (455aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Heavy metal sensor kinase n=2 Tax=Clostridium RepID=B6FR15_9CLOT
Sensor protein basS/pmrB
L1_008_364G1_scaffold_149_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25827..26501)
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=B6FR14_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEA81522.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA-binding response regulator
L1_008_364G1_scaffold_149_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26528..27361)
DNA (834bp) protein (278aa)
PRD domain protein n=2 Tax=Clostridium RepID=B6FR13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22021.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcriptional antiterminator, BglG
L1_008_364G1_scaffold_149_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27470..29608)
DNA (2139bp) protein (713aa)
PTS system, glucose-like IIB component n=2 Tax=Clostridium RepID=B6FR12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22019.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1)
L1_008_364G1_scaffold_149_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29975..31399
DNA (1425bp) protein (475aa)
Phospholipase D domain protein {ECO:0000313|EMBL:EEA81519.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEA81519.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Phospholipase D domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR11_9CLOT
hypothetical protein
L1_008_364G1_scaffold_149_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31591..31992
DNA (402bp) protein (134aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Clostridium RepID=B6FR10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22015.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Rrf2 family protein
L1_008_364G1_scaffold_149_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32077..33960
DNA (1884bp) protein (628aa)
Carbon-monoxide dehydrogenase, catalytic subunit {ECO:0000313|EMBL:EEA81517.1}; EC=1.2.99.2 {ECO:0000313|EMBL:EEA81517.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
cooS_2; carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase, catalytic subunit n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR09_9CLOT
L1_008_364G1_scaffold_149_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33972..34424
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6QJB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22012.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
anaerobic dimethylsulfoxide reductase subunit B
L1_008_364G1_scaffold_149_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34421..35644
DNA (1224bp) protein (408aa)
noxA; nitrate reductase, NADH oxidase subunit NoxA (EC:1.7.1.4)
Nitrate reductase, NADH oxidase subunit n=2 Tax=Clostridium RepID=B6FR07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22011.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_364G1_scaffold_149_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35692..41085)
DNA (5394bp) protein (1798aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR06_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA81514.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Uncharacterised Sugar-binding Domain.
Displaying items 1-30 of 41 in total

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