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L1_008_364G1_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_239_1
unknown

Not on your lists

comp(1..60)
DNA (60bp) protein (20aa)

This feature has no annotations

L1_008_364G1_scaffold_239_2
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(94..2040)
DNA (1947bp) protein (649aa)
succinate dehydrogenase subunit A (EC:1.3.5.1)
Succinate dehydrogenase or fumarate reductase flavoprotein subunit n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AZM9_9BACE
Succinate dehydrogenase or fumarate reductase flavoprotein subunit {ECO:0000313|EMBL:CDA46637.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L1_008_364G1_scaffold_239_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2076..2780)
DNA (705bp) protein (235aa)
succinate dehydrogenase subunit C (EC:1.3.5.1)
Succinate dehydrogenase cytochrome B subunit, b558 family n=3 Tax=Bacteroides RepID=B0NS30_BACSE
Succinate dehydrogenase cytochrome B subunit, b558 family {ECO:0000313|EMBL:EDS14606.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L1_008_364G1_scaffold_239_4
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2943..3845)
DNA (903bp) protein (301aa)
Transcriptional regulator, AraC family n=3 Tax=Bacteroides RepID=B0NS28_BACSE
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDS14604.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
AraC family transcriptional regulator
L1_008_364G1_scaffold_239_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3959..4561
DNA (603bp) protein (201aa)
PAP2 family protein n=2 Tax=Bacteroides stercoris RepID=B0NS27_BACSE
PAP2 family protein {ECO:0000313|EMBL:EDS14603.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
phosphoesterase PA-phosphatase related protein
L1_008_364G1_scaffold_239_6
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4575..6197)
DNA (1623bp) protein (541aa)
Peptidase, S41 family {ECO:0000313|EMBL:EDS14602.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDS14602.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Peptidase, S41 family n=2 Tax=Bacteroides stercoris RepID=B0NS26_BACSE
peptidase 3
L1_008_364G1_scaffold_239_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6220..6687)
DNA (468bp) protein (156aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=2 Tax=Bacteroides stercoris RepID=B0NS25_BACSE
L1_008_364G1_scaffold_239_8
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6684..8588)
DNA (1905bp) protein (635aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Bacteroides RepID=B0NS24_BACSE
Topoisomerase IV subunit B {ECO:0000313|EMBL:EPH21856.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
DNA topoisomerase type IIA subunit B region 2 domain protein
L1_008_364G1_scaffold_239_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9063..10196)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NS22_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21855.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L1_008_364G1_scaffold_239_10
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10254..11216)
DNA (963bp) protein (321aa)
K+-dependent Na+/Ca+ exchanger family protein n=2 Tax=Bacteroides stercoris RepID=B0NS21_BACSE
K+-dependent Na+/Ca+ exchanger family protein {ECO:0000313|EMBL:EDS14597.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Na+/Ca+ antiporter, CaCA family
L1_008_364G1_scaffold_239_11
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11498..12430)
DNA (933bp) protein (311aa)
Ser/Thr phosphatase family protein n=2 Tax=Bacteroides RepID=B0NS19_BACSE
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDA46627.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
metallophosphoesterase
L1_008_364G1_scaffold_239_12
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12533..15301)
DNA (2769bp) protein (923aa)
TonB-dependent receptor n=2 Tax=Bacteroides RepID=B0NS18_BACSE
TonB-dependent receptor {ECO:0000313|EMBL:CDA46625.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
TonB-dependent outer membrane protein
L1_008_364G1_scaffold_239_13
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15508..16716)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NS17_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14593.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L1_008_364G1_scaffold_239_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16823..19723)
DNA (2901bp) protein (967aa)
Chondroitin sulfate ABC lyase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NS16_BACSE
Chondroitin sulfate ABC lyase {ECO:0000256|PIRNR:PIRNR034515}; Chondroitin ABC eliminase {ECO:0000256|PIRNR:PIRNR034515}; Chondroitin ABC lyase {ECO:0000256|PIRNR:PIRNR034515}; Chondroitinase ABC {ECO:0000256|PIRNR:PIRNR034515}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Polysaccharide lyase family 8, C-terminal beta-sandwich domain./Lyase, catalytic./Polysaccharide lyase family 8, super-sandwich domain./Lyase, N terminal.
L1_008_364G1_scaffold_239_15
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19899..21497)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YFP1_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21849.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
RagB/SusD domain-containing protein
L1_008_364G1_scaffold_239_16
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21522..24665)
DNA (3144bp) protein (1048aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=B0NS14_BACSE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDA46621.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
TonB-dependent receptor plug
L1_008_364G1_scaffold_239_17
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25698..25907
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM 17855 RepID=B6W2E6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23849.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
helix-turn-helix protein
L1_008_364G1_scaffold_239_18
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25904..27037
DNA (1134bp) protein (378aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
Cytosine-specific methyltransferase n=1 Tax=Bacteroides dorei DSM 17855 RepID=B6W2E5_9BACE
DNA-cytosine methyltransferase
L1_008_364G1_scaffold_239_19
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27024..28103
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM 17855 RepID=B6W2E4_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23847.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
Restriction endonuclease, type II, SacI
L1_008_364G1_scaffold_239_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28106..29128
DNA (1023bp) protein (341aa)
Putative transcriptional regulator n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LGZ6_PARD8
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABR44960.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L1_008_364G1_scaffold_239_21
Prevotella amnii, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29285..30517
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Prevotella amnii RepID=UPI00035C5630
Uncharacterized protein {ECO:0000313|EMBL:KGF49985.1}; TaxID=1401066 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella amnii DNF00058.;"
hypothetical protein
L1_008_364G1_scaffold_239_22
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30570..31064)
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6YZC9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET13997.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_008_364G1_scaffold_239_23
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31137..32348)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IHT8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES69332.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
Relaxase/mobilization nuclease
L1_008_364G1_scaffold_239_24
Bacteroides sp. CAG:462, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32364..32759)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Bacteroides barnesiae RepID=UPI00035C4FEA
Uncharacterized protein {ECO:0000313|EMBL:CDD83753.1}; TaxID=1262740 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:462.;"
hypothetical protein
L1_008_364G1_scaffold_239_25
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32934..33629)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NEP3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02585.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L1_008_364G1_scaffold_239_26
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33681..34061)
DNA (381bp) protein (127aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3RCS7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21096.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
hypothetical protein
L1_008_364G1_scaffold_239_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34165..35550)
DNA (1386bp) protein (462aa)
Virulence-associated protein E n=1 Tax=Bacteroides sp. CAG:462 RepID=R7D0T0_9BACE
Virulence-associated E family protein {ECO:0000313|EMBL:KDS11588.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
L1_008_364G1_scaffold_239_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35555..35872)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NFP1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KDS11589.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
L1_008_364G1_scaffold_239_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36048..37292)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3RCT0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY71849.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L1_008_364G1_scaffold_239_30
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37311..38798)
DNA (1488bp) protein (496aa)
Integrase n=2 Tax=Bacteroides RepID=E5UNG7_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EET14005.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
Displaying items 1-30 of 56 in total

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