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L1_008_364G1_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_250_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..504
DNA (504bp) protein (168aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Probable dual-specificity RNA methyltransferase RlmN n=7 Tax=Bacteroides RepID=RLMN_BACV8
ribosomal RNA large subunit methyltransferase N
L1_008_364G1_scaffold_250_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

530..1594
DNA (1065bp) protein (355aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9A4B6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY82580.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_008_364G1_scaffold_250_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1621..2721
DNA (1101bp) protein (367aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=5 Tax=Bacteroides RepID=C6Z661_9BACE
4-hydroxythreonine-4-phosphate dehydrogenase
L1_008_364G1_scaffold_250_4
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2763..3473
DNA (711bp) protein (237aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L3J2_BACV8
nucleoside-diphosphate-sugar pyrophosphorylase
Uncharacterized protein {ECO:0000313|EMBL:EFV66665.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_364G1_scaffold_250_5
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3493..4344
DNA (852bp) protein (284aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L3J3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66666.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_364G1_scaffold_250_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4352..5302
DNA (951bp) protein (317aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L3J4_BACV8
hypothetical protein
CDP-alcohol phosphatidyltransferase family protein {ECO:0000313|EMBL:KDS30449.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_364G1_scaffold_250_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5329..6300
DNA (972bp) protein (324aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I9A4B1_BACVU
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:ABR40259.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_364G1_scaffold_250_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6305..7027
DNA (723bp) protein (241aa)
HAD hydrolase, family IA, variant 3 n=3 Tax=Bacteroides vulgatus RepID=D4VEC8_BACVU
HAD family hydrolase
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:KDS30447.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_364G1_scaffold_250_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7034..8233
DNA (1200bp) protein (400aa)
Fucose permease n=7 Tax=Bacteroides RepID=A6L3J7_BACV8
fucose permease
H+ symporter permease {ECO:0000313|EMBL:KDS56674.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_364G1_scaffold_250_10
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8287..9183)
DNA (897bp) protein (299aa)
Kinase, PfkB family n=5 Tax=Bacteroides RepID=C6Z668_9BACE
ribokinase
Ribokinase {ECO:0000313|EMBL:EFV66671.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_364G1_scaffold_250_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9319..10626
DNA (1308bp) protein (436aa)
Myo-inositol-1-phosphate synthase n=7 Tax=Bacteroides RepID=A6L3J9_BACV8
myo-inositol-1-phosphate synthase
Myo-inositol-1-phosphate synthase {ECO:0000313|EMBL:ABR40263.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_364G1_scaffold_250_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10793..12058
DNA (1266bp) protein (422aa)
Transcriptional regulator n=7 Tax=Bacteroides RepID=A6L3K0_BACV8
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABR40264.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_364G1_scaffold_250_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12045..12572
DNA (528bp) protein (176aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3K1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82569.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_364G1_scaffold_250_14
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12589..13341
DNA (753bp) protein (251aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z672_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV66675.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L1_008_364G1_scaffold_250_15
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13347..13712
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P246_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18402.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
secG; preprotein translocase subunit SecG
L1_008_364G1_scaffold_250_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13873..14631
DNA (759bp) protein (253aa)
Exodeoxyribonuclease n=6 Tax=Bacteroides RepID=A6L3K4_BACV8
exodeoxyribonuclease
Exodeoxyribonuclease III (Xth) {ECO:0000313|EMBL:EOS05535.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_364G1_scaffold_250_17
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14874..15080
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L3K5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18404.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_364G1_scaffold_250_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15303..16007)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HND3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS05537.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_364G1_scaffold_250_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16335..16841)
DNA (507bp) protein (169aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
6,7-dimethyl-8-ribityllumazine synthase n=7 Tax=Bacteroides RepID=RISB_BACV8
ribH; 6,7-dimethyl-8-ribityllumazine synthase
L1_008_364G1_scaffold_250_20
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16934..17611)
DNA (678bp) protein (226aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3K8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66680.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_364G1_scaffold_250_21
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17764..18879
DNA (1116bp) protein (372aa)
DNA replication and repair protein RecF n=7 Tax=Bacteroides RepID=RECF_BACV8
DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_008_364G1_scaffold_250_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18876..19166
DNA (291bp) protein (97aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3L0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05541.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_364G1_scaffold_250_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19332..19793)
DNA (462bp) protein (154aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
5-formyltetrahydrofolate cyclo-ligase n=4 Tax=Bacteroides RepID=C6Z681_9BACE
5-formyltetrahydrofolate cyclo-ligase
L1_008_364G1_scaffold_250_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19786..21534)
DNA (1749bp) protein (583aa)
Carboxy-terminal processing protease n=7 Tax=Bacteroides RepID=A6L3L3_BACV8
C-terminal processing peptidase {ECO:0000313|EMBL:EOS05543.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
carboxy-terminal processing protease
L1_008_364G1_scaffold_250_25
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21549..21983)
DNA (435bp) protein (145aa)
Deoxycytidylate deaminase n=16 Tax=Bacteroides RepID=A6L3L4_BACV8
deoxycytidylate deaminase
dCMP deaminase {ECO:0000313|EMBL:EOS13646.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
L1_008_364G1_scaffold_250_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21988..22482)
DNA (495bp) protein (165aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L3L5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05545.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_364G1_scaffold_250_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22496..24538)
DNA (2043bp) protein (681aa)
Peptidase family M3 n=3 Tax=Bacteroides vulgatus RepID=D4VB27_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY82555.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
peptidyl-dipeptidase
L1_008_364G1_scaffold_250_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24696..25373)
DNA (678bp) protein (226aa)
Transcriptional regulator n=4 Tax=Bacteroides RepID=A6L3L7_BACV8
transcriptional regulator
Transcription regulator, CRP family {ECO:0000313|EMBL:KDS32199.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_364G1_scaffold_250_29
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25561..26163
DNA (603bp) protein (201aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=A6L3L8_BACV8
membrane protein
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_364G1_scaffold_250_30
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26322..27338)
DNA (1017bp) protein (339aa)
Thiamine biosynthesis lipoprotein apbE n=4 Tax=Bacteroides RepID=A6L3L9_BACV8
thiamine biosynthesis lipoprotein apbE precursor
Thiamine biosynthesis lipoprotein apbE {ECO:0000313|EMBL:CDF18417.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Displaying items 1-30 of 55 in total

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