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L1_008_364G1_scaffold_293

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_293_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..522
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TKK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66240.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_364G1_scaffold_293_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

542..667
DNA (126bp) protein (42aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B4N3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66239.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_364G1_scaffold_293_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

757..981
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TKI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66238.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_364G1_scaffold_293_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

966..2498
DNA (1533bp) protein (511aa)
Hemerythrin HHE cation binding domain protein n=4 Tax=Clostridiales RepID=A7B4N1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66237.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_364G1_scaffold_293_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2526..3050
DNA (525bp) protein (175aa)
L-lactate dehydrogenase (EC:1.1.1.27)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U533_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66236.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_364G1_scaffold_293_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3111..3788)
DNA (678bp) protein (226aa)
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases n=4 Tax=Clostridiales RepID=D4JAM3_9FIRM
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EEA81747.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_008_364G1_scaffold_293_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3915..4049
DNA (135bp) protein (45aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A7B4M8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48613.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_008_364G1_scaffold_293_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4130..4456
DNA (327bp) protein (109aa)
Cupin domain n=5 Tax=Clostridiales RepID=D4JAM4_9FIRM
Cupin domain.
Uncharacterized protein {ECO:0000313|EMBL:EGN48612.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_008_364G1_scaffold_293_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4484..4693)
DNA (210bp) protein (70aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A7B4M6_RUMGN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN48611.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_008_364G1_scaffold_293_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4990..5553
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BY88_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48610.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_008_364G1_scaffold_293_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5651..6415
DNA (765bp) protein (255aa)
Phosphorylase family n=4 Tax=Clostridiales RepID=A7B4M4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ68070.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
purine phosphorylase family 1
L1_008_364G1_scaffold_293_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6567..7010
DNA (444bp) protein (148aa)
DNA-binding helix-turn-helix protein n=4 Tax=Clostridiales RepID=A7B4M3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48608.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
putative transcriptional regulator
L1_008_364G1_scaffold_293_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7081..7725
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68068.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_364G1_scaffold_293_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7835..8815)
DNA (981bp) protein (327aa)
ApbE family protein n=4 Tax=Clostridiales RepID=A7B4M1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48607.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L1_008_364G1_scaffold_293_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8956..10380
DNA (1425bp) protein (475aa)
Phospholipase D domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UA81_9FIRM
Phospholipase D domain protein {ECO:0000313|EMBL:CCZ68066.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_364G1_scaffold_293_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10467..10820
DNA (354bp) protein (118aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A7B4L9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ68065.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_364G1_scaffold_293_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10844..11341
DNA (498bp) protein (166aa)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TXL5_9FIRM
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000313|EMBL:CCZ68064.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_364G1_scaffold_293_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11368..11970
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Holliday junction DNA helicase RuvA n=4 Tax=Clostridiales RepID=A7B4L8_RUMGN
Holliday junction DNA helicase subunit RuvA
L1_008_364G1_scaffold_293_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11989..12993
DNA (1005bp) protein (335aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Holliday junction ATP-dependent DNA helicase RuvB n=4 Tax=Clostridiales RepID=A7B4L7_RUMGN
Holliday junction DNA helicase, RuvB subunit
L1_008_364G1_scaffold_293_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13080..13490
DNA (411bp) protein (137aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B4L6_RUMGN
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
cell division protein ZapA
L1_008_364G1_scaffold_293_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13631..15862
DNA (2232bp) protein (744aa)
Collagenase and related proteases (EC:3.4.-.-)
Peptidase U32 family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQW3_9FIRM
Peptidase U32 family {ECO:0000313|EMBL:CCZ68060.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_364G1_scaffold_293_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15877..17301
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TXL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68059.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Bacterial cell division membrane protein
L1_008_364G1_scaffold_293_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17303..18691
DNA (1389bp) protein (463aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQN2_9FIRM
Cell division protein FtsI/penicillin-binding protein 2
L1_008_364G1_scaffold_293_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18725..19069
DNA (345bp) protein (115aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B4L2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48596.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_008_364G1_scaffold_293_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19076..19993
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UA75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68056.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Protein of unknown function (DUF2953).
L1_008_364G1_scaffold_293_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20029..20436
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68055.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_364G1_scaffold_293_27
unknown

Not on your lists

20498..20638
DNA (141bp) protein (47aa)

This feature has no annotations

L1_008_364G1_scaffold_293_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20757..20942)
DNA (186bp) protein (62aa)
50S ribosomal protein L28 n=4 Tax=Clostridiales RepID=A7B4K8_RUMGN
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
LSU ribosomal protein L28P
L1_008_364G1_scaffold_293_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21178..21789
DNA (612bp) protein (204aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B4K7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77284.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L1_008_364G1_scaffold_293_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21859..22221
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UGY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68052.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
Displaying items 1-30 of 69 in total

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