ggKbase home page

L1_008_364G1_scaffold_328

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_328_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..497)
DNA (495bp) protein (165aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Pseudouridine synthase n=3 Tax=Bacteroides RepID=A5ZK22_9BACE
ribosomal large subunit pseudouridine synthase D
L1_008_364G1_scaffold_328_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(524..1174)
DNA (651bp) protein (217aa)
PASTA domain protein n=3 Tax=Bacteroides RepID=A5ZK21_9BACE
PASTA domain protein {ECO:0000313|EMBL:EDM19509.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_364G1_scaffold_328_3
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(1548..1709)
DNA (162bp) protein (54aa)
50S ribosomal protein L34 n=27 Tax=Bacteroides RepID=RL34_BACTN
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L1_008_364G1_scaffold_328_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1903..2469
DNA (567bp) protein (189aa)
Elongation factor P n=3 Tax=Bacteroides RepID=A5ZK19_9BACE
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
translation elongation factor P (EF-P)
L1_008_364G1_scaffold_328_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2572..3972
DNA (1401bp) protein (467aa)
Alkaline phosphatase (EC:3.1.3.1)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9EBV5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72727.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_364G1_scaffold_328_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4051..4815)
DNA (765bp) protein (255aa)
hypothetical protein (EC:3.6.1.-)
UDP-2 3-diacylglucosamine hydrolase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3R2_9BACE
UDP-2 3-diacylglucosamine hydrolase {ECO:0000313|EMBL:CCZ72728.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_364G1_scaffold_328_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4812..5123)
DNA (312bp) protein (104aa)
FeS assembly SUF system protein n=3 Tax=Bacteroides RepID=I9PLP8_9BACE
FeS assembly SUF system protein {ECO:0000313|EMBL:EIY17391.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_364G1_scaffold_328_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5239..5934)
DNA (696bp) protein (232aa)
DNA repair protein RadC n=2 Tax=Bacteroides caccae RepID=A5ZK15_9BACE
DNA repair protein RadC {ECO:0000313|EMBL:EDM19503.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
DNA repair protein
L1_008_364G1_scaffold_328_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6249..7238)
DNA (990bp) protein (330aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDM19502.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDM19502.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Glycosyltransferase, group 2 family protein n=3 Tax=Bacteroides RepID=A5ZK14_9BACE
Glycosyltransferases, probably involved in cell wall biogenesis
L1_008_364G1_scaffold_328_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7380..8579)
DNA (1200bp) protein (400aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=3 Tax=Bacteroides RepID=A5ZK13_9BACE
L1_008_364G1_scaffold_328_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8607..9626)
DNA (1020bp) protein (340aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:EDM19500.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EDM19500.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
phosphotransacetylase (EC:2.3.1.8)
Phosphate acetyltransferase n=3 Tax=Bacteroides RepID=A5ZK12_9BACE
L1_008_364G1_scaffold_328_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9821..10264
DNA (444bp) protein (148aa)
LrgA family protein n=3 Tax=Bacteroides RepID=A5ZK11_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72735.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Putative effector of murein hydrolase LrgA
L1_008_364G1_scaffold_328_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10261..10956
DNA (696bp) protein (232aa)
TIGR00659 family protein n=2 Tax=Bacteroides RepID=I8UWM9_9BACE
TIGR00659 family protein {ECO:0000313|EMBL:CCZ72736.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Putative effector of murein hydrolase
L1_008_364G1_scaffold_328_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11012..11929
DNA (918bp) protein (306aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PM77_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17398.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_364G1_scaffold_328_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12014..12856)
DNA (843bp) protein (281aa)
TonB-dependent receptor n=2 Tax=Bacteroides RepID=A5ZK07_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:CCZ72738.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
outer membrane transport energization protein TonB
L1_008_364G1_scaffold_328_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13008..14018
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UAT2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72739.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted acetyltransferase involved in intracellular survival and related acetyltransferases
L1_008_364G1_scaffold_328_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14030..15163)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PLQ6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17401.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_364G1_scaffold_328_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15168..16181)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5UNM6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19492.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_364G1_scaffold_328_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16218..16463)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5UNM6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72741.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_364G1_scaffold_328_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16479..17501)
DNA (1023bp) protein (341aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bacteroides caccae RepID=A5ZK03_9BACE
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EDM19491.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_364G1_scaffold_328_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17529..18785)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZK02_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19490.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_364G1_scaffold_328_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18909..20816)
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UT87_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17405.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
beta-glucanase
L1_008_364G1_scaffold_328_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20833..22368)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZK00_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17406.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
beta-glucanase
L1_008_364G1_scaffold_328_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22387..23280)
DNA (894bp) protein (298aa)
F5/8 type C domain protein n=2 Tax=Bacteroides caccae RepID=A5ZJZ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17407.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
coagulation factor 5/8 type domain protein
L1_008_364G1_scaffold_328_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23309..24946)
DNA (1638bp) protein (546aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PM84_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17408.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
starch-binding protein
L1_008_364G1_scaffold_328_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24975..27989)
DNA (3015bp) protein (1005aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides RepID=I9EBX1_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY17409.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
TonB-dependent receptor
L1_008_364G1_scaffold_328_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28022..29950)
DNA (1929bp) protein (643aa)
SusD family protein n=3 Tax=Bacteroides RepID=A5ZJZ6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17410.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_364G1_scaffold_328_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29969..33100)
DNA (3132bp) protein (1044aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=A5ZJZ5_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM19483.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
collagen-binding protein
L1_008_364G1_scaffold_328_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33350..34423)
DNA (1074bp) protein (358aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UNN5_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CCZ72751.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
two-component system sensor histidine kinase/response regulator
Displaying 29 items

View Taxonomy