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L1_008_364G1_scaffold_396

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_396_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(545..1201)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83290.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_364G1_scaffold_396_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1381..2268
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKZ6_9CLOT
LysR substrate binding domain protein {ECO:0000313|EMBL:EEA83291.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transcriptional regulator
L1_008_364G1_scaffold_396_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2279..2935)
DNA (657bp) protein (219aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL11_9CLOT
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EEA83266.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_364G1_scaffold_396_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3021..3644
DNA (624bp) protein (208aa)
4Fe-4S binding domain protein n=2 Tax=Clostridium RepID=B6FL12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22806.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
4Fe-4S binding domain.
L1_008_364G1_scaffold_396_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3801..4289
DNA (489bp) protein (163aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium RepID=B6FL13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22805.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
acetyltransferase
L1_008_364G1_scaffold_396_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4331..5383
DNA (1053bp) protein (351aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FL14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22804.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ATPase AAA
L1_008_364G1_scaffold_396_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5380..5898
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83270.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_364G1_scaffold_396_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5939..7339
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22803.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_364G1_scaffold_396_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7341..7979
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FL17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22802.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_364G1_scaffold_396_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7936..11331
DNA (3396bp) protein (1132aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PWD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22801.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_364G1_scaffold_396_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11291..12490
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83274.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Uncharacterized protein conserved in bacteria C-term(DUF2220).
L1_008_364G1_scaffold_396_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13028..13537
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PPS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22799.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
thiW protein
L1_008_364G1_scaffold_396_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13551..14402
DNA (852bp) protein (284aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEN3_9CLOT
L1_008_364G1_scaffold_396_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14392..15027
DNA (636bp) protein (212aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL22_9CLOT
L1_008_364G1_scaffold_396_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15040..15846
DNA (807bp) protein (269aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EEA83278.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EEA83278.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=2 Tax=Clostridium RepID=B6FL23_9CLOT
L1_008_364G1_scaffold_396_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15848..17146
DNA (1299bp) protein (433aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Phosphomethylpyrimidine synthase n=2 Tax=Clostridium RepID=B6FL24_9CLOT
thiC; thiamine biosynthesis protein ThiC
L1_008_364G1_scaffold_396_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17243..17917
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=B6FL25_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEA83280.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_364G1_scaffold_396_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17914..19149
DNA (1236bp) protein (412aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridium RepID=B6FL26_9CLOT
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L1_008_364G1_scaffold_396_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19291..19419
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FL27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22792.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
VTC domain-containing protein
L1_008_364G1_scaffold_396_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19465..20010
DNA (546bp) protein (182aa)
VTC domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL28_9CLOT
VTC domain protein {ECO:0000313|EMBL:EEA83283.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
VTC domain-containing protein
L1_008_364G1_scaffold_396_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20003..20698
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22790.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_364G1_scaffold_396_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20710..22401
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PPQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22789.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_364G1_scaffold_396_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22432..23481
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22788.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Glycosyltransferase Family 2 protein
L1_008_364G1_scaffold_396_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23590..24417
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83221.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
exopolysaccharide biosynthesis protein
L1_008_364G1_scaffold_396_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24392..24778
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PWC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22786.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
membrane protein
L1_008_364G1_scaffold_396_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24800..25405
DNA (606bp) protein (202aa)
RelA/SpoT domain protein n=2 Tax=Clostridium RepID=B6FL35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22785.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_364G1_scaffold_396_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25694..28024
DNA (2331bp) protein (777aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PPQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22784.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ferrous iron transporter FeoB
L1_008_364G1_scaffold_396_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28140..29684
DNA (1545bp) protein (515aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
GMP synthase [glutamine-hydrolyzing] n=2 Tax=Clostridium RepID=B6FL37_9CLOT
GMP synthase
L1_008_364G1_scaffold_396_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29847..30446)
DNA (600bp) protein (200aa)
Site-specific recombinase, phage integrase family n=2 Tax=Clostridium RepID=B6FL68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22782.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Site-specific recombinase XerD
Displaying 29 items

View Taxonomy