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L1_008_364G1_scaffold_541

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_541_1
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..692)
DNA (690bp) protein (230aa)
ABC transporter permease protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XSJ1_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDA11756.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
polar amino acid ABC transporter inner membrane subunit
L1_008_364G1_scaffold_541_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(772..1641)
DNA (870bp) protein (290aa)
ABC transporter substrate-binding protein family 3 n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XA82_9CLOT
ABC transporter substrate-binding protein family 3 {ECO:0000313|EMBL:CDA11755.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
extracellular solute-binding protein
L1_008_364G1_scaffold_541_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1982..3310)
DNA (1329bp) protein (443aa)
Amino acid permease n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6I5_9FIRM
Amino acid permease {ECO:0000313|EMBL:EDQ97797.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
putative amino acid permease
L1_008_364G1_scaffold_541_4
unknown

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comp(3921..4271)
DNA (351bp) protein (117aa)

This feature has no annotations

L1_008_364G1_scaffold_541_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4618..5970
DNA (1353bp) protein (451aa)
Amino acid permease n=2 Tax=Clostridiales RepID=B0A6I3_9FIRM
Amino acid permease {ECO:0000313|EMBL:CDA11753.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
putative amino acid permease
L1_008_364G1_scaffold_541_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6134..6787)
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A6I2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97794.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_008_364G1_scaffold_541_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6979..8463)
DNA (1485bp) protein (495aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Glutamate--tRNA ligase n=2 Tax=Clostridiales RepID=B0A6I1_9FIRM
gltX; glutamyl-tRNA synthetase
L1_008_364G1_scaffold_541_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8605..10320)
DNA (1716bp) protein (572aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
proS; prolyl-tRNA ligase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XA78_9CLOT
L1_008_364G1_scaffold_541_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10630..11112)
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XH78_9CLOT
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L1_008_364G1_scaffold_541_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11345..12061)
DNA (717bp) protein (239aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ispD; 2-C-methyl-D-erythritol 4-phosphatecytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=Clostridiales RepID=B0A6H8_9FIRM
L1_008_364G1_scaffold_541_11
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12565..13551)
DNA (987bp) protein (329aa)
Transketolase pyridine binding domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y531_9CLOT
Transketolase pyridine binding domain protein {ECO:0000313|EMBL:CDA11747.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta
L1_008_364G1_scaffold_541_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13588..14550)
DNA (963bp) protein (321aa)
UPI0003D66977 related cluster n=1 Tax=unknown RepID=UPI0003D66977
Uncharacterized protein {ECO:0000313|EMBL:ETI92296.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
L1_008_364G1_scaffold_541_13
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14927..15883)
DNA (957bp) protein (319aa)
Putative sugar-binding domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XA75_9CLOT
Putative sugar-binding domain protein {ECO:0000313|EMBL:CDA11745.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
transcriptional regulator, DeoR family
L1_008_364G1_scaffold_541_14
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16076..17098)
DNA (1023bp) protein (341aa)
PTS system glucitol/sorbitol-specific IIBC component n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XH74_9CLOT
PTS system glucitol/sorbitol-specific IIBC component {ECO:0000313|EMBL:CDA11744.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L1_008_364G1_scaffold_541_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17123..17644)
DNA (522bp) protein (174aa)
UPI0003D658D8 related cluster n=1 Tax=unknown RepID=UPI0003D658D8
Uncharacterized protein {ECO:0000313|EMBL:ETI92299.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
PTS system, glucitol/sorbitol-specific, IIC subunit
L1_008_364G1_scaffold_541_16
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17855..18220)
DNA (366bp) protein (122aa)
PTS system glucitol/sorbitol-specific IIA component n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6H2_9FIRM
PTS system glucitol/sorbitol-specific IIA component {ECO:0000313|EMBL:EDQ97784.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
srlB; PTS system transporter subunit IIA
L1_008_364G1_scaffold_541_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18608..19921)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XSI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI92301.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L1_008_364G1_scaffold_541_18
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20247..20675)
DNA (429bp) protein (143aa)
Glucitol operon activator protein (GutM) n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XA71_9CLOT
Glucitol operon activator protein (GutM) {ECO:0000313|EMBL:CDA11740.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L1_008_364G1_scaffold_541_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20698..22680)
DNA (1983bp) protein (661aa)
PRD domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XH71_9CLOT
PRD domain protein {ECO:0000313|EMBL:CDA11739.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
transcription antiterminator
L1_008_364G1_scaffold_541_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22802..23332)
DNA (531bp) protein (177aa)
6-O-methylguanine DNA methyltransferase DNA binding domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X7W4_9CLOT
6-O-methylguanine DNA methyltransferase DNA binding domain protein {ECO:0000313|EMBL:CDA11738.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
O-6-methylguanine DNA methyltransferase
L1_008_364G1_scaffold_541_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23481..24086)
DNA (606bp) protein (202aa)
PIN domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6G7_9FIRM
PIN domain protein {ECO:0000313|EMBL:EDQ97779.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_008_364G1_scaffold_541_22
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24636..25703)
DNA (1068bp) protein (356aa)
DNA integrity scanning protein DisA n=2 Tax=Clostridiales RepID=B0A6G6_9FIRM
DNA integrity scanning protein DisA {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00010389}; Cyclic di-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01438}; Diadenylate cyclase {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00207481}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
DNA integrity scanning protein DisA
L1_008_364G1_scaffold_541_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25712..27079)
DNA (1368bp) protein (456aa)
radA; DNA repair protein (EC:2.1.1.63)
DNA repair protein radA n=2 Tax=Clostridiales RepID=B0A6G5_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L1_008_364G1_scaffold_541_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27318..29765)
DNA (2448bp) protein (816aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6G4_9FIRM
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EDQ97776.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
clpC; class III stress response-related ATPase
L1_008_364G1_scaffold_541_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29824..30813)
DNA (990bp) protein (330aa)
mcsB; Tyrosine kinase protein (EC:2.7.3.-)
ATP:guanido phosphotransferase C-terminal catalytic domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X7V7_9CLOT
ATP:guanido phosphotransferase C-terminal catalytic domain protein {ECO:0000313|EMBL:CDA11733.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L1_008_364G1_scaffold_541_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30825..31418)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6G2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97774.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
McsA protein
L1_008_364G1_scaffold_541_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31718..33652)
DNA (1935bp) protein (645aa)
Putative translation elongation factor G n=2 Tax=Clostridiales RepID=B0A6G1_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:CDA11731.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
putative translation elongation factor
L1_008_364G1_scaffold_541_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34021..37476)
DNA (3456bp) protein (1152aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
pycA; pyruvate carboxylase (EC:6.4.1.1)
Pyruvate carboxylase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6G0_9FIRM
L1_008_364G1_scaffold_541_29
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37936..38349)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A6F9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11729.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
Displaying 29 items

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