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L1_008_364G1_scaffold_545

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_545_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(333..1112)
DNA (780bp) protein (260aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Phosphate ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B1U8_BIFLN
pstB; pstb
L1_008_364G1_scaffold_545_2
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1165..2163)
DNA (999bp) protein (333aa)
Phosphate ABC transporter permease component n=9 Tax=Bifidobacterium RepID=E8MGR6_BIFL2
phosphate ABC transporter permease
Phosphate ABC transporter {ECO:0000313|EMBL:CCY95351.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_008_364G1_scaffold_545_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2163..3116)
DNA (954bp) protein (318aa)
ABC-type phosphate transport system permease component n=13 Tax=Bifidobacterium RepID=B3DTP8_BIFLD
phosphate ABC transporter permease
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EIJ22271.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_364G1_scaffold_545_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3327..4460)
DNA (1134bp) protein (378aa)
Phosphate-binding protein PstS n=13 Tax=Bacteria RepID=D6DA26_BIFLN
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_008_364G1_scaffold_545_5
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4710..5480)
DNA (771bp) protein (257aa)
Response regulator of two-component system n=2 Tax=Bifidobacterium longum RepID=Q8G7F0_BIFLO
Response regulator receiver domain-containing protein {ECO:0000313|EMBL:EFV37947.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
response regulator of two-component system
L1_008_364G1_scaffold_545_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5613..6944)
DNA (1332bp) protein (444aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
His Kinase A (Phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=14 Tax=Bacteria RepID=D6DA28_BIFLN
two-component sensor kinase
L1_008_364G1_scaffold_545_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7195..7908)
DNA (714bp) protein (238aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Methylthioadenosine nucleosidase n=14 Tax=Bifidobacterium RepID=D6DA30_BIFLN
nucleosidase
L1_008_364G1_scaffold_545_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8030..9262)
DNA (1233bp) protein (411aa)
3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase n=14 Tax=Bifidobacterium RepID=B3DTQ4_BIFLD
phospho-2-dehydro-3-deoxyheptonate aldolase
3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase {ECO:0000313|EMBL:ACD98523.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_364G1_scaffold_545_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9391..10524)
DNA (1134bp) protein (378aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361, ECO:0000313|EMBL:CBK71035.1};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=16 Tax=Bifidobacterium RepID=B3DTQ5_BIFLD
phospho-2-dehydro-3-deoxyheptonate aldolase
L1_008_364G1_scaffold_545_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10816..12159)
DNA (1344bp) protein (448aa)
Aminopeptidase {ECO:0000313|EMBL:ESV32904.1}; EC=3.4.22.40 {ECO:0000313|EMBL:ESV32904.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Aminopeptidase C n=9 Tax=Bifidobacterium longum RepID=D6DA33_BIFLN
aminopeptidase
L1_008_364G1_scaffold_545_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12274..13860)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E8E4_BIFLI
Cell division protein {ECO:0000313|EMBL:KHD95164.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L1_008_364G1_scaffold_545_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14008..14685)
DNA (678bp) protein (226aa)
Pyroglutamyl-peptidase I . Cysteine peptidase. MEROPS family C15 n=10 Tax=Bifidobacterium RepID=D6DA35_BIFLN
pyrrolidone-carboxylate peptidase
Pyrrolidone-carboxylate peptidase {ECO:0000313|EMBL:AAN24163.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_008_364G1_scaffold_545_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14695..15570)
DNA (876bp) protein (292aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=3 Tax=Bifidobacterium RepID=ISPD_BIFLO
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L1_008_364G1_scaffold_545_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15650..16630)
DNA (981bp) protein (327aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DTR0_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI81739.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_008_364G1_scaffold_545_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16711..18357)
DNA (1647bp) protein (549aa)
Possible protease or peptidase n=10 Tax=Bifidobacterium RepID=Q8G7E0_BIFLO
protease or peptidase
Collagenase {ECO:0000313|EMBL:KEY23471.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_364G1_scaffold_545_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18431..19246
DNA (816bp) protein (272aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
tRNA (guanine-N(1)-)-methyltransferase n=14 Tax=Bifidobacterium RepID=TRMD_BIFLO
trmD; trmd
L1_008_364G1_scaffold_545_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19270..19881)
DNA (612bp) protein (204aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=Q8G7D9_BIFLO
n6-adenine-specific methylase
Uncharacterized protein {ECO:0000313|EMBL:CCY95336.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_008_364G1_scaffold_545_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20108..22951)
DNA (2844bp) protein (948aa)
Putative DNA/RNA helicase n=1 Tax=Bifidobacterium longum E18 RepID=V6XWM9_BIFLN
Putative DNA/RNA helicase {ECO:0000313|EMBL:ESV32896.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
recG; ATP-dependent DNA helicase
L1_008_364G1_scaffold_545_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(23051..23251)
DNA (201bp) protein (67aa)
50S ribosomal protein L28 n=18 Tax=Bifidobacterium RepID=RL28_BIFLD
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_364G1_scaffold_545_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23589..24605
DNA (1017bp) protein (339aa)
Carbohydrate kinase n=2 Tax=Bifidobacterium longum RepID=B7GU20_BIFLS
sugar kinase
Sugar kinase {ECO:0000313|EMBL:KEY23476.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_364G1_scaffold_545_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24827..25429
DNA (603bp) protein (201aa)
Permeases of the major facilitator superfamily n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DA42_BIFLN
Permeases of the major facilitator superfamily
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:CBK71045.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_008_364G1_scaffold_545_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25381..25944
DNA (564bp) protein (188aa)
Vacuole effluxer Atg22-like protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AT51_BIFLN
MFS transporter {ECO:0000313|EMBL:KEY28788.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L1_008_364G1_scaffold_545_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25811..26707)
DNA (897bp) protein (299aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=Q8G7D5_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24173.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_008_364G1_scaffold_545_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27526..28020
DNA (495bp) protein (165aa)
Methylated DNA-protein cysteine methyltransferase n=16 Tax=Bifidobacterium RepID=B3DTS9_BIFLD
methyltransferase
Cysteine methyltransferase {ECO:0000313|EMBL:KEY31738.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_364G1_scaffold_545_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28342..29748
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum D2957 RepID=S3DRP1_BIFLN
hypothetical protein
PF11187 family protein {ECO:0000313|EMBL:EIJ30818.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_008_364G1_scaffold_545_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29839..30570
DNA (732bp) protein (244aa)
AcrR-type transcriptional regulator n=15 Tax=Bifidobacterium RepID=B3DTT1_BIFLD
transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EIJ22270.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_364G1_scaffold_545_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30688..32121
DNA (1434bp) protein (478aa)
Aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase {ECO:0000313|EMBL:CBK71057.1}; EC=4.3.1.1 {ECO:0000313|EMBL:CBK71057.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Aspartate ammonia-lyase n=7 Tax=Bacteria RepID=E8MGP2_BIFL2
L1_008_364G1_scaffold_545_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32202..32999
DNA (798bp) protein (266aa)
Small-conductance mechanosensitive channel n=10 Tax=Bifidobacterium longum RepID=D6DA55_BIFLN
mscS; mscs
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:EEQ54396.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_008_364G1_scaffold_545_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33038..34069)
DNA (1032bp) protein (344aa)
Predicted metal-dependent membrane protease n=9 Tax=Bifidobacterium longum RepID=D6DA56_BIFLN
hypothetical protein
Predicted metal-dependent membrane protease {ECO:0000313|EMBL:CBK71059.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_008_364G1_scaffold_545_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34385..35662)
DNA (1278bp) protein (426aa)
ABC-type spermidine/putrescine transport systems, ATPase components n=11 Tax=Bifidobacterium longum RepID=D6DA57_BIFLN
potA; pota
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEI81718.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Displaying items 1-30 of 46 in total

View Taxonomy