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L1_008_364G1_scaffold_561

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_561_1
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61..729)
DNA (669bp) protein (223aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LLX9_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL20840.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_364G1_scaffold_561_2
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(719..1357)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A8V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ24656.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L1_008_364G1_scaffold_561_3
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1370..2062)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LFD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60523.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
helix-turn-helix type 11 domain-containing protein
L1_008_364G1_scaffold_561_4
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2010..2618)
DNA (609bp) protein (203aa)
DNA primase n=4 Tax=Clostridiales RepID=C4ZE61_EUBR3
DNA primase (bacterial type)
DNA primase (Bacterial type) {ECO:0000313|EMBL:CBK82241.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L1_008_364G1_scaffold_561_5
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2618..3133)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLL7_9FIRM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK46954.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L1_008_364G1_scaffold_561_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3208..3852)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90B1 RepID=N9WQI7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90235.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_008_364G1_scaffold_561_7
unknown

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comp(4197..4286)
DNA (90bp) protein (30aa)

This feature has no annotations

L1_008_364G1_scaffold_561_8
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4307..4963)
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3ATU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87111.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L1_008_364G1_scaffold_561_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4960..5811)
DNA (852bp) protein (284aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KL42_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBL07594.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_561_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5815..6186)
DNA (372bp) protein (124aa)
Predicted transcriptional regulators n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KL41_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL07593.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_561_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6816..8027)
DNA (1212bp) protein (404aa)
SAM-dependent methyltransferase (EC:2.1.1.-)
SAM-dependent methyltransferase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B8H2_9FIRM
SAM-dependent methyltransferase {ECO:0000313|EMBL:CDA55366.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_364G1_scaffold_561_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8356..9426
DNA (1071bp) protein (357aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AWH1_9FIRM
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CDA55365.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Glycosyltransferases involved in cell wall biogenesis
L1_008_364G1_scaffold_561_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9621..10964
DNA (1344bp) protein (448aa)
Acetyl-CoA hydrolase n=5 Tax=Bacteria RepID=D4L489_9FIRM
Acetyl-CoA hydrolase
Acetyl-CoA hydrolase {ECO:0000313|EMBL:CBL07589.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_561_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11173..11880)
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7GB36_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14428.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_364G1_scaffold_561_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11973..12650)
DNA (678bp) protein (226aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7GB35_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07587.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_561_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12673..13560)
DNA (888bp) protein (296aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GB34_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEV00986.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type multidrug transport system, ATPase component
L1_008_364G1_scaffold_561_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13574..13939)
DNA (366bp) protein (122aa)
Transcriptional regulator, GntR family n=3 Tax=Roseburia RepID=D4L485_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDA53983.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_364G1_scaffold_561_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14206..15090)
DNA (885bp) protein (295aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase n=2 Tax=Roseburia RepID=D4L484_9FIRM
L-serine ammonia-lyase {ECO:0000313|EMBL:CDA53984.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_364G1_scaffold_561_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15120..15785)
DNA (666bp) protein (222aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:CBL07583.1}; EC=4.3.1.17 {ECO:0000313|EMBL:CBL07583.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=3 Tax=Roseburia RepID=D4KL31_9FIRM
L1_008_364G1_scaffold_561_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15952..16902)
DNA (951bp) protein (317aa)
Transcriptional regulator n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KL30_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL07582.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_561_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16895..18034)
DNA (1140bp) protein (380aa)
ABC-type sulfate/molybdate transport systems, ATPase component n=2 Tax=Roseburia intestinalis RepID=D4KL29_9FIRM
ABC-type sulfate/molybdate transport systems, ATPase component
ABC-type sulfate/molybdate transport systems, ATPase component {ECO:0000313|EMBL:CBL14421.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_364G1_scaffold_561_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18103..18807)
DNA (705bp) protein (235aa)
Molybdate ABC transporter, permease protein n=2 Tax=Roseburia intestinalis RepID=D4KL28_9FIRM
molybdate ABC transporter, permease protein
Molybdate ABC transporter, permease protein {ECO:0000313|EMBL:CBL07580.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_561_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18954..19961)
DNA (1008bp) protein (336aa)
Molybdenum ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KL27_9FIRM
molybdenum ABC transporter, periplasmic molybdate-binding protein
Molybdenum ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:CBL07579.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_561_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20175..21131)
DNA (957bp) protein (319aa)
Putative xanthine dehydrogenase accessory protein XdhC n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GB26_9FIRM
Putative xanthine dehydrogenase accessory protein XdhC {ECO:0000313|EMBL:EEV00978.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
L1_008_364G1_scaffold_561_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21165..21599)
DNA (435bp) protein (145aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Roseburia intestinalis RepID=D4L477_9FIRM
hypothetical protein
MOSC domain protein {ECO:0000313|EMBL:EEV00977.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_364G1_scaffold_561_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21940..22944)
DNA (1005bp) protein (335aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Molybdenum cofactor biosynthesis protein A, bacterial n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L476_9FIRM
molybdenum cofactor biosynthesis protein A, bacterial
L1_008_364G1_scaffold_561_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22986..24011)
DNA (1026bp) protein (342aa)
Molybdopterin biosynthesis enzyme n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KL23_9FIRM
Molybdopterin biosynthesis enzyme
Molybdopterin biosynthesis enzyme {ECO:0000313|EMBL:CBL07575.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_364G1_scaffold_561_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24035..24862)
DNA (828bp) protein (276aa)
Selenium-dependent molybdenum hydroxylase system protein YqeB family n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6APR0_9FIRM
Selenium-dependent molybdenum hydroxylase system protein YqeB family {ECO:0000313|EMBL:CDA54003.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
selenium-dependent molybdenum hydroxylase system protein, YqeB family
L1_008_364G1_scaffold_561_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24907..25143)
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GB21_9FIRM
Protein of unknown function (DUF3343).
Uncharacterized protein {ECO:0000313|EMBL:CDA54004.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_364G1_scaffold_561_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25311..26354)
DNA (1044bp) protein (348aa)
selenophosphate synthase (EC:2.7.9.3)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Selenide, water dikinase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L473_9FIRM
Displaying items 1-30 of 37 in total

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