ggKbase home page

L1_008_364G1_scaffold_620

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_620_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45..1451
DNA (1407bp) protein (469aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Amidophosphoribosyltransferase n=8 Tax=root RepID=A6L6X7_BACV8
amidophosphoribosyltransferase
L1_008_364G1_scaffold_620_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1559..2779
DNA (1221bp) protein (407aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=4 Tax=Bacteroides RepID=D4V714_BACVU
L1_008_364G1_scaffold_620_3
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2815..3900
DNA (1086bp) protein (362aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Aminomethyltransferase n=3 Tax=Bacteroides RepID=C6ZBJ9_9BACE
L1_008_364G1_scaffold_620_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3813..3995)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLX9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04791.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_364G1_scaffold_620_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4106..6373
DNA (2268bp) protein (756aa)
TrkA-C domain protein n=4 Tax=Bacteroides vulgatus RepID=D4V716_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY75682.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Na+/H+ antiporter
L1_008_364G1_scaffold_620_6
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6398..6823
DNA (426bp) protein (142aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A6L6X3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18888.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_364G1_scaffold_620_7
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6914..7342)
DNA (429bp) protein (143aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L6X2_BACV8
hypothetical protein
S4 domain-containing protein {ECO:0000313|EMBL:EFV67911.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_364G1_scaffold_620_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7342..7905)
DNA (564bp) protein (188aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Peptidyl-tRNA hydrolase n=8 Tax=root RepID=PTH_BACV8
L1_008_364G1_scaffold_620_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7930..8526)
DNA (597bp) protein (199aa)
50S ribosomal protein L25 n=6 Tax=Bacteroides RepID=RL25_BACV8
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_364G1_scaffold_620_10
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8706..9089)
DNA (384bp) protein (128aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6L6W9_BACV8
DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18892.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_364G1_scaffold_620_11
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9285..10211
DNA (927bp) protein (309aa)
Transcription antitermination factor NusB n=14 Tax=Bacteroides RepID=C3Q7P0_9BACE
nitrogen utilization protein
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L1_008_364G1_scaffold_620_12
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10268..10582
DNA (315bp) protein (105aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6L6W7_BACV8
preprotein translocase subunit YajC
Uncharacterized protein {ECO:0000313|EMBL:CDF18894.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_364G1_scaffold_620_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10596..11609
DNA (1014bp) protein (338aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L6W6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY75674.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_364G1_scaffold_620_14
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11602..12198
DNA (597bp) protein (199aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Dephospho-CoA kinase n=3 Tax=Bacteroides RepID=D4V6Y9_BACVU
dephospho-CoA kinase
L1_008_364G1_scaffold_620_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12265..12705
DNA (441bp) protein (147aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=I8ZKZ5_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY75672.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_008_364G1_scaffold_620_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12582..12866)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HL51_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04778.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_364G1_scaffold_620_17
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13817..16405)
DNA (2589bp) protein (863aa)
ATP-dependent chaperone protein ClpB n=6 Tax=Bacteroides RepID=C6Z7Y0_9BACE
endopeptidase Clp ATP-binding subunit B
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_364G1_scaffold_620_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16680..17261
DNA (582bp) protein (194aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L6W1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY75617.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_364G1_scaffold_620_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17274..17636
DNA (363bp) protein (121aa)
LysR substrate binding domain protein n=7 Tax=Bacteroides RepID=C3Q7P9_9BACE
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EIY75616.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_364G1_scaffold_620_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17618..18109
DNA (492bp) protein (164aa)
LysR substrate binding domain protein n=8 Tax=root RepID=C6Z7X8_9BACE
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS04775.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_364G1_scaffold_620_21
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18198..19184
DNA (987bp) protein (329aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z7X7_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV67848.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_364G1_scaffold_620_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19277..20566)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P502_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS31112.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_364G1_scaffold_620_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20644..21126)
DNA (483bp) protein (161aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9U1B3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS55147.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_008_364G1_scaffold_620_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21260..21769
DNA (510bp) protein (170aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L6V6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04771.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_364G1_scaffold_620_25
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21789..21908
DNA (120bp) protein (40aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7P114_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF19429.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_364G1_scaffold_620_26
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21917..22120
DNA (204bp) protein (68aa)
Sec-independent protein translocase protein TatA n=6 Tax=Bacteroides RepID=C6Z7X3_9BACE
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
preprotein translocase subunit TatA
L1_008_364G1_scaffold_620_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22127..22957
DNA (831bp) protein (277aa)
Sec-independent protein translocase protein TatC n=5 Tax=Bacteroides RepID=A6L6V5_BACV8
Sec-independent protein translocase
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_364G1_scaffold_620_28
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22881..23027)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1K9A8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ19405.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
L1_008_364G1_scaffold_620_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23044..24135)
DNA (1092bp) protein (364aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Alanine dehydrogenase n=4 Tax=Bacteroides vulgatus RepID=A6L6V4_BACV8
alanine dehydrogenase
L1_008_364G1_scaffold_620_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24329..25999
DNA (1671bp) protein (557aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L6V3_BACV8
Peptidase M23 family protein {ECO:0000313|EMBL:KDS55141.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
Displaying items 1-30 of 68 in total

View Taxonomy