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L1_008_364G1_scaffold_795

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_795_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..497)
DNA (495bp) protein (165aa)
General secretion pathway protein C n=5 Tax=Escherichia coli RepID=E0R688_ECOLX
gspC; general secretion pathway protein C
General secretory pathway component, cryptic {ECO:0000313|EMBL:CAR04928.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L1_008_364G1_scaffold_795_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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677..2146
DNA (1470bp) protein (490aa)
General secretory pathway component, cryptic n=99 Tax=Escherichia RepID=B7MCT8_ECO45
gspA; general secretory pathway component, cryptic
General secretory pathway component, cryptic {ECO:0000313|EMBL:CAR04927.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L1_008_364G1_scaffold_795_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2148..2567
DNA (420bp) protein (140aa)
Protein pioO n=203 Tax=Escherichia RepID=E2QFH9_ECOLX
pioO; chromosome replication protein PioO
Protein pioO {ECO:0000313|EMBL:ELJ67781.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L1_008_364G1_scaffold_795_4

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comp(2536..2742)
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ19021.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_008_364G1_scaffold_795_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2805..3116
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1436 Tax=Enterobacteriaceae RepID=RS10_ECO24
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L1_008_364G1_scaffold_795_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3149..3778
DNA (630bp) protein (210aa)
50S ribosomal protein L3 n=1423 Tax=Enterobacteriaceae RepID=RL3_ECO24
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
L1_008_364G1_scaffold_795_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3789..4394
DNA (606bp) protein (202aa)
50S ribosomal protein L4 n=2030 Tax=Enterobacteriaceae RepID=RL4_CITK8
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
L1_008_364G1_scaffold_795_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4391..4693
DNA (303bp) protein (101aa)
50S ribosomal protein L23 n=1424 Tax=Enterobacteriaceae RepID=RL23_ECO57
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L1_008_364G1_scaffold_795_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4711..5532
DNA (822bp) protein (274aa)
50S ribosomal protein L2 n=1397 Tax=Enterobacteriaceae RepID=RL2_ECO24
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
L1_008_364G1_scaffold_795_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5549..5827
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1467 Tax=Gammaproteobacteria RepID=RS19_CITK8
30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L1_008_364G1_scaffold_795_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5842..6174
DNA (333bp) protein (111aa)
50S ribosomal protein L22 n=1956 Tax=Enterobacteriaceae RepID=RL22_CITK8
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L1_008_364G1_scaffold_795_12
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6192..6893
DNA (702bp) protein (234aa)
30S ribosomal protein S3 n=2042 Tax=Enterobacteriaceae RepID=RS3_CITK8
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=687914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Rissen str. 150.;"
L1_008_364G1_scaffold_795_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6906..7316
DNA (411bp) protein (137aa)
50S ribosomal protein L16 n=1441 Tax=Enterobacteriaceae RepID=RL16_CITK8
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
L1_008_364G1_scaffold_795_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7316..7507
DNA (192bp) protein (64aa)
50S ribosomal protein L29 n=1412 Tax=Enterobacteriaceae RepID=RL29_ECO24
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
L1_008_364G1_scaffold_795_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7507..7761
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=1461 Tax=Enterobacteriaceae RepID=RS17_CROS8
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=910348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P12b.;"
L1_008_364G1_scaffold_795_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7926..8297
DNA (372bp) protein (124aa)
50S ribosomal protein L14 n=1446 Tax=Enterobacteriaceae RepID=RL14_ECO24
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L1_008_364G1_scaffold_795_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8308..8622
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=390 Tax=Escherichia RepID=RL24_ECO27
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
L1_008_364G1_scaffold_795_18
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8637..9176
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1584 Tax=Bacteria RepID=RL5_ECO24
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1432552 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS43.;"
L1_008_364G1_scaffold_795_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9191..9496
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1408 Tax=Enterobacteriaceae RepID=RS14_ECO24
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L1_008_364G1_scaffold_795_20
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9530..9922
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1992 Tax=Enterobacteriaceae RepID=RS8_CITK8
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE52.;"
L1_008_364G1_scaffold_795_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9935..10468
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1402 Tax=Enterobacteriaceae RepID=RL6_ECO24
ribosomal protein
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
L1_008_364G1_scaffold_795_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10478..10831
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1600 Tax=Bacteria RepID=RL18_CITK8
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L1_008_364G1_scaffold_795_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10846..11349
DNA (504bp) protein (168aa)
30S ribosomal protein S5 n=2034 Tax=Enterobacteriaceae RepID=RS5_CITK8
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
L1_008_364G1_scaffold_795_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11353..11532
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=1450 Tax=Enterobacteriaceae RepID=RL30_ECO24
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
L1_008_364G1_scaffold_795_25
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11536..11970
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=1830 Tax=Enterobacteriaceae RepID=RL15_CITK8
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
L1_008_364G1_scaffold_795_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11978..13309
DNA (1332bp) protein (444aa)
Protein translocase subunit SecY n=1381 Tax=Enterobacteriaceae RepID=SECY_ECO57
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L1_008_364G1_scaffold_795_27
Klebsiella sp. OBRC7, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13341..13457
DNA (117bp) protein (39aa)
50S ribosomal protein L36 1 n=1875 Tax=Enterobacteriaceae RepID=RL361_CROS8
LSU ribosomal protein L36P
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=936565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. OBRC7.;"
L1_008_364G1_scaffold_795_28
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13604..13960
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=1379 Tax=Enterobacteriaceae RepID=RS13_ECO57
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
L1_008_364G1_scaffold_795_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13977..14366
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1412 Tax=Enterobacteriaceae RepID=RS11_ECO24
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
L1_008_364G1_scaffold_795_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14400..15020
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=1016 Tax=Enterobacteriaceae RepID=RS4_CITK8
SSU ribosomal protein S4P
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
Displaying items 1-30 of 36 in total

View Taxonomy