ggKbase home page

L1_008_364G1_scaffold_799

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_799_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2..520
DNA (519bp) protein (173aa)
30S ribosomal protein S1 n=6 Tax=Bifidobacterium breve RepID=F6CA43_BIFBA
SSU ribosomal protein S1P
SSU ribosomal protein S1P {ECO:0000313|EMBL:AHJ20935.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_799_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

605..1294
DNA (690bp) protein (230aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Dephospho-CoA kinase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6CA42_BIFBA
L1_008_364G1_scaffold_799_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1460..3571
DNA (2112bp) protein (704aa)
UvrABC system protein B n=5 Tax=Bifidobacterium breve RepID=F6CA41_BIFBA
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
uvrB; Excinuclease ABC subunit B, involved in nucleotide excision repair
L1_008_364G1_scaffold_799_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3605..4591
DNA (987bp) protein (329aa)
Tellurium resistance protein TerC-like integral membrane protein n=4 Tax=Bifidobacterium breve RepID=F9XYJ1_BIFBU
terC; Tellurium resistance protein TerC-like integral membrane protein
Integral membrane protein, TerC family {ECO:0000313|EMBL:EFE89294.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99746.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_364G1_scaffold_799_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4761..6203
DNA (1443bp) protein (481aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Pyruvate kinase n=4 Tax=Bifidobacterium breve RepID=F6CA39_BIFBA
Pyruvate kinase
L1_008_364G1_scaffold_799_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6327..6926)
DNA (600bp) protein (200aa)
Hydrolase, NUDIX family n=5 Tax=Bifidobacterium breve RepID=F6CA38_BIFBA
ADP-ribose pyrophosphatase
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFE89296.1}; Putative NTP pyrophosphatase {ECO:0000313|EMBL:BAQ99748.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_364G1_scaffold_799_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7261..8049
DNA (789bp) protein (263aa)
Response regulator receiver domain protein n=6 Tax=Bifidobacterium breve RepID=F6CA37_BIFBA
Putative response regulator with RNA-binding domain
Putative response regulator with RNA-binding domain {ECO:0000313|EMBL:AHJ20941.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_799_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8088..10943
DNA (2856bp) protein (952aa)
DNA-directed DNA polymerase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CSX3_BIFBR
DNA polymerase I {ECO:0000313|EMBL:AHJ20942.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
DNA polymerase I
L1_008_364G1_scaffold_799_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11081..12001
DNA (921bp) protein (307aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Bifidobacterium breve RepID=D4BNR2_BIFBR
NIF3-related protein
L1_008_364G1_scaffold_799_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12044..12718
DNA (675bp) protein (225aa)
Hydrolase, NUDIX family n=5 Tax=Bifidobacterium breve RepID=F6CA34_BIFBA
Phosphohydrolase (MutT/nudix family protein)
Phosphohydrolase (MutT/nudix family protein) {ECO:0000313|EMBL:AHJ20944.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_799_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12771..14912
DNA (2142bp) protein (714aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Glycogen debranching enzyme GlgX n=2 Tax=Bifidobacterium breve RepID=F6CA33_BIFBA
Glycogen operon protein glgX
L1_008_364G1_scaffold_799_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15050..15226
DNA (177bp) protein (59aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=U2E5D9_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20946.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_008_364G1_scaffold_799_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15286..16071)
DNA (786bp) protein (262aa)
IstB-like ATP-binding protein n=3 Tax=Bifidobacterium breve RepID=F6CAA8_BIFBA
Transposase
IstB-like ATP-binding protein {ECO:0000313|EMBL:AEF27773.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_364G1_scaffold_799_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16074..17555)
DNA (1482bp) protein (494aa)
Transposase n=2 Tax=Bifidobacterium breve RepID=F9Y2V1_BIFBU
Transposase
Transposase {ECO:0000313|EMBL:ABE96183.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_008_364G1_scaffold_799_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17949..18143
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTJ4_BIFLJ
hypothetical protein
Zinc ribbon domain protein {ECO:0000313|EMBL:EIJ23168.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_364G1_scaffold_799_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18287..18937
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYK1_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ19033.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_008_364G1_scaffold_799_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18913..19146)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNR8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE89305.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
hypothetical protein
L1_008_364G1_scaffold_799_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19106..19258)
DNA (153bp) protein (51aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZX42_BIFBR
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:KHD96106.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_008_364G1_scaffold_799_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19953..20627
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI000300D01C
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27296.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_008_364G1_scaffold_799_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20789..21961
DNA (1173bp) protein (391aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=H3L050_BIFBR
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EPD74649.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_008_364G1_scaffold_799_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21989..23323
DNA (1335bp) protein (445aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJV8_BIFBR
L1_008_364G1_scaffold_799_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23537..24508)
DNA (972bp) protein (324aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Acetate kinase n=13 Tax=Bacteria RepID=D6D950_BIFLN
acetate kinase
L1_008_364G1_scaffold_799_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24640..26310)
DNA (1671bp) protein (557aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:ABE95457.1}; EC=2.3.1.8 {ECO:0000313|EMBL:ABE95457.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Phosphate acetyltransferase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYK6_BIFBU
Phosphate acetyltransferase
L1_008_364G1_scaffold_799_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26731..27765)
DNA (1035bp) protein (345aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNS5_BIFBR
Ribose-phosphate pyrophosphokinase
L1_008_364G1_scaffold_799_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27894..29825)
DNA (1932bp) protein (644aa)
Acyltransferase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNS6_BIFBR
Acyltransferase family protein {ECO:0000313|EMBL:AHJ20955.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Acyltransferase family protein
L1_008_364G1_scaffold_799_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30516..31187
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=H3L056_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74655.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L1_008_364G1_scaffold_799_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31440..32906
DNA (1467bp) protein (489aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GX28_BIFLN
Transposase
Uncharacterized protein {ECO:0000313|EMBL:EEI80258.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_008_364G1_scaffold_799_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32903..33664
DNA (762bp) protein (254aa)
IstB-like ATP-binding protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMR1_BIFBR
Transposase
IstB-like ATP-binding protein {ECO:0000313|EMBL:EFE89760.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_008_364G1_scaffold_799_29
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34413..34631
DNA (219bp) protein (73aa)
DNA binding domain, excisionase family n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EB73_9ACTN
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:CBL04970.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_364G1_scaffold_799_30
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

34628..34726
DNA (99bp) protein (33aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH94652.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Displaying items 1-30 of 38 in total

View Taxonomy