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L1_008_364G1_scaffold_819

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_364G1_scaffold_819_1
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(42..1259)
DNA (1218bp) protein (406aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=3 Tax=Bacteroides RepID=C6ZA96_9BACE
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
L1_008_364G1_scaffold_819_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1324..2412
DNA (1089bp) protein (363aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6ZA97_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY74031.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
DNA mismatch repair protein
L1_008_364G1_scaffold_819_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2440..2850
DNA (411bp) protein (137aa)
Phenylacetic acid degradation protein n=8 Tax=root RepID=E5UVA7_9BACE
phenylacetic acid degradation protein
Phenylacetic acid degradation protein PaaD {ECO:0000313|EMBL:EIY74032.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_364G1_scaffold_819_4
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2930..3538)
DNA (609bp) protein (203aa)
Uncharacterized protein n=7 Tax=root RepID=C6ZA99_9BACE
histidine decarboxylase
Histidine decarboxylase {ECO:0000313|EMBL:EFV66916.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_364G1_scaffold_819_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3997..5703)
DNA (1707bp) protein (569aa)
Acyl-CoA dehydrogenase n=7 Tax=Bacteroides RepID=A6KX84_BACV8
Uncharacterized protein {ECO:0000313|EMBL:EIY74034.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
acyl-CoA dehydrogenase
L1_008_364G1_scaffold_819_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5745..6125)
DNA (381bp) protein (127aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A6KX83_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY74035.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_364G1_scaffold_819_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6161..7180)
DNA (1020bp) protein (340aa)
Electron transfer flavoprotein alpha-subunit n=7 Tax=Bacteroides RepID=A6KX82_BACV8
electron transfer flavoprotein subunit alpha
Uncharacterized protein {ECO:0000313|EMBL:EIY74036.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_364G1_scaffold_819_8
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7186..8079)
DNA (894bp) protein (298aa)
Electron transfer flavoprotein beta-subunit n=8 Tax=Bacteroides RepID=A6KX81_BACV8
electron transfer flavoprotein subunit beta
Electron transfer flavoprotein domain protein {ECO:0000313|EMBL:EET17812.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_008_364G1_scaffold_819_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8392..8652
DNA (261bp) protein (87aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6KX80_BACV8
hypothetical protein
NVEALA family protein {ECO:0000313|EMBL:KDS54873.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_364G1_scaffold_819_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8731..9795
DNA (1065bp) protein (355aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KX79_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR38043.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_364G1_scaffold_819_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9792..10370
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HFZ9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS00100.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_364G1_scaffold_819_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10367..11188
DNA (822bp) protein (274aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Signal peptidase I n=3 Tax=Bacteroides RepID=D4VBI8_BACVU
signal peptidase I
L1_008_364G1_scaffold_819_13
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11342..11443
DNA (102bp) protein (34aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KX76_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17433.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_364G1_scaffold_819_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11440..11865
DNA (426bp) protein (142aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KX76_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS00098.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_364G1_scaffold_819_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11997..13394
DNA (1398bp) protein (466aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=2 Tax=Bacteroides vulgatus RepID=D4VBJ1_BACVU
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein {ECO:0000313|EMBL:KDS26270.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
outer membrane efflux protein oprM
L1_008_364G1_scaffold_819_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13449..14579
DNA (1131bp) protein (377aa)
Cation efflux pump n=6 Tax=Bacteroides RepID=E5UVB9_9BACE
cation efflux pump
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EIY74044.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_364G1_scaffold_819_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14584..17700
DNA (3117bp) protein (1039aa)
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family protein n=5 Tax=root RepID=D4VBJ3_BACVU
cation efflux pump
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EIY74045.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_364G1_scaffold_819_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17817..19010
DNA (1194bp) protein (398aa)
Transporter, small conductance mechanosensitive ion channel (MscS) family protein n=3 Tax=Bacteroides vulgatus RepID=D4VBJ4_BACVU
membrane transport protein
Putative membrane transport protein {ECO:0000313|EMBL:ABR38036.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_364G1_scaffold_819_19
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19129..20625)
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=7 Tax=Bacteroides RepID=C6ZAB3_9BACE
two-component system sensor histidine kinase
L1_008_364G1_scaffold_819_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20796..23105
DNA (2310bp) protein (770aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KX70_BACV8
Uncharacterized protein {ECO:0000313|EMBL:ABR38034.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L1_008_364G1_scaffold_819_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23250..23612
DNA (363bp) protein (121aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8ZEX5_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS00091.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_364G1_scaffold_819_22
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24052..27297
DNA (3246bp) protein (1082aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=C6ZAB6_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EET17825.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
collagen-binding protein
L1_008_364G1_scaffold_819_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27311..28801
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H865_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS00089.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
starch-binding protein
L1_008_364G1_scaffold_819_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28955..31105)
DNA (2151bp) protein (717aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EFG16611.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EFG16611.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase large subunit n=5 Tax=Bacteroides RepID=A6KX66_BACV8
L1_008_364G1_scaffold_819_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31115..33025)
DNA (1911bp) protein (637aa)
Methylmalonyl-CoA mutase, small subunit n=6 Tax=root RepID=C6ZAB9_9BACE
Methylmalonyl-CoA mutase, small subunit {ECO:0000313|EMBL:EOS00087.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
methylmalonyl-CoA mutase small subunit
L1_008_364G1_scaffold_819_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33311..34981
DNA (1671bp) protein (557aa)
TrkA C-terminal domain protein n=7 Tax=root RepID=C6ZAC0_9BACE
AspT/YidE/YbjL antiporter duplication domain-containing protein {ECO:0000313|EMBL:EIY74055.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_008_364G1_scaffold_819_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35097..36731
DNA (1635bp) protein (545aa)
ATP-binding cassette, subfamily F, member 3 n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HFX9_BACVU
ATP-binding cassette, subfamily F, member 3 {ECO:0000313|EMBL:EOS00085.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
ABC transporter ATP-binding protein
L1_008_364G1_scaffold_819_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36771..36893
DNA (123bp) protein (41aa)
RNA polymerase sigma-70 factor n=6 Tax=Bacteroides RepID=D4VC73_BACVU
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EOS00084.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying 28 items

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